Pairwise Alignments

Query, 396 a.a., hypothetical SAM-dependent methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 391 a.a., 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI from Escherichia coli ECRC62

 Score =  470 bits (1209), Expect = e-137
 Identities = 231/389 (59%), Positives = 283/389 (72%)

Query: 7   LKPGREKSLERRHPWVFSNGIHNVKGKPEPGQTVDVVAHDGHWLGRGAWSGESQIQVRVW 66
           L  GREKSL RRHPWVFS  +  ++GK   G+T+D+V H G WL RGA+S  SQI+ RVW
Sbjct: 2   LAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVDHQGKWLARGAYSPASQIRARVW 61

Query: 67  TFDREEEIDREFFKRRILRAQAGRDDLIREQGLTGYRLIAAESDGLPGITIDKYANVLVC 126
           TFD  E ID  FF RR+ +AQ  RD L ++ GL  YRLIA ESDGLPGITID++ N LV 
Sbjct: 62  TFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRFGNFLVL 121

Query: 127 QLLSMGADVWRDTIVDVLAELYPDCAIYERSDVDSRKKEGLASTMGLLHGTLPEMPLIIE 186
           QLLS GA+  R  ++  L  LYP+CAIY+RSDV  RKKEG+  T GL+ G LP   L IE
Sbjct: 122 QLLSAGAEYQRAALISALQTLYPECAIYDRSDVAVRKKEGMELTQGLVTGELPPALLPIE 181

Query: 187 ENGIKIAVDVTKGHKTGFYLDQRDNRAIAARFVKGKSVLNCFCYTGTFGLYAAKAGAASI 246
           E+G+K+ VD+  GHKTG+YLDQRD+R    R+V+ K VLNCF YTG F + A   G + +
Sbjct: 182 EHGMKLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSALMGGCSQV 241

Query: 247 ENVDVSSLALDTARLNMRVNGLSDDNVHYNEADVFKLLRQYRDEGKTFDVIVLDPPKFAD 306
            +VD S  ALD AR N+ +N L      +   DVFKLLR YRD G+ FDVIV+DPPKF +
Sbjct: 242 VSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVE 301

Query: 307 NKSQLNGACRGYKDINMIALQLLNPGGVLLTFSCSGLMPADLFQKIVADAALDAKREIQF 366
           NKSQL GACRGYKDINM+A+QLLN GG+LLTFSCSGLM +DLFQKI+ADAA+DA R++QF
Sbjct: 302 NKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQF 361

Query: 367 IERLSQASDHPIGSAFPEGFYLKGLVARV 395
           IE+  QA+DHP+ + +PEG YLKG   RV
Sbjct: 362 IEQFRQAADHPVIATYPEGLYLKGFACRV 390