Pairwise Alignments

Query, 362 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 550 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  107 bits (266), Expect = 1e-27
 Identities = 82/259 (31%), Positives = 130/259 (50%), Gaps = 31/259 (11%)

Query: 3   FNSRLKAENEALKQKL-----LEQQRRYEVEIEELKNMARENEAMQQQSRQNTDLYSDVI 57
           FN  L +    L+Q +     LEQ  R   E+  L   A ++   QQ+  ++     D  
Sbjct: 261 FNGLLDSLQGTLRQVIETAAPLEQMSR---ELHRLTQGAEDSARSQQERTESISRDIDT- 316

Query: 58  ACQNQGGEMLNAVRDGIASSAEILTEEKESLS----ELDKIFDQTRVAIVNLGNRATYIN 113
                   M N++++ +A  +E  +E+  + +    E     D   ++I +LGN      
Sbjct: 317 --------MTNSIQE-VAQRSEQASEQASAAARQANEARHNIDSLSLSIGDLGN------ 361

Query: 114 KQATSSMQAVTELNSTTSSINQFVAAIQGISEQTNLLALNAAIEAARAGEAGRGFAVVAD 173
               SS+QA+ +L + T  +   +  I+ I+EQTNLLALNAAIEAARAGE GRGFAVVAD
Sbjct: 362 -SVLSSVQAMEQLEAETQHVGSVLTVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVAD 420

Query: 174 EVRQLASKAHEASSQIEKLVKQIVTQASNIKEIVHNNQNSALDVASSSTQIGQVVEDVLQ 233
           EVR LA K   +++QI+ +++++   AS++   ++ N   A      S    Q +E +  
Sbjct: 421 EVRNLAQKTTASTAQIQDIIQRLQNSASSVLHAMNLNGEKARSSIQRSEHATQTLEAITG 480

Query: 234 RSNNMQQVIHNAATASFLN 252
               + ++  NA  A F N
Sbjct: 481 AVRQIDEL--NAGIARFTN 497