Pairwise Alignments

Query, 362 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

 Score =  103 bits (258), Expect = 1e-26
 Identities = 55/140 (39%), Positives = 87/140 (62%)

Query: 110 TYINKQATSSMQAVTELNSTTSSINQFVAAIQGISEQTNLLALNAAIEAARAGEAGRGFA 169
           T ++++ + S   +  LN++T  I + +  I+GIS+QTNLLALNAAIEAARAGEAGRGFA
Sbjct: 450 TALSQRISESCAQIETLNASTDEIGKILDVIKGISQQTNLLALNAAIEAARAGEAGRGFA 509

Query: 170 VVADEVRQLASKAHEASSQIEKLVKQIVTQASNIKEIVHNNQNSALDVASSSTQIGQVVE 229
           VVADEVR LA +  E++ +I +++  +   +      ++ +Q S+      + Q G+ + 
Sbjct: 510 VVADEVRNLAHRTQESAEEIHRMITSLQVGSREAVHTMNTSQVSSEQTVQVANQAGERLA 569

Query: 230 DVLQRSNNMQQVIHNAATAS 249
            V QR   +  +  + ATA+
Sbjct: 570 SVTQRIGEIDGMNQSVATAT 589



 Score = 30.8 bits (68), Expect = 1e-04
 Identities = 40/189 (21%), Positives = 81/189 (42%), Gaps = 13/189 (6%)

Query: 99  RVAIVN---LGNRATYINKQATSSMQAVTELNSTTSSINQFV--------AAIQGISEQT 147
           R+A+ N    G  AT  N+       +++E++S T  ++           A+I G SE+ 
Sbjct: 338 RLAVQNKDEFGELATSFNRFVERIHASISEVSSATRLVHDLSEKVVSASNASIIG-SEEQ 396

Query: 148 NLLALNAAIEAARAGEAGRGFAVVADEVRQLASKAHEASSQIEKLVKQIVTQASNIKEIV 207
           ++   + A      G A +  A  A +  Q AS A E +    ++V++ ++  + + + +
Sbjct: 397 SMRTNSVAAAINELGAATQEIARNAADASQHASGASEQAHGGREVVEEAISAMTALSQRI 456

Query: 208 HNNQNSALDVASSSTQIGQVVEDVLQRSNNMQQVIHNAA-TASFLNTTKLDHAVWKSNVY 266
             +      + +S+ +IG++++ +   S     +  NAA  A+         AV    V 
Sbjct: 457 SESCAQIETLNASTDEIGKILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVR 516

Query: 267 QLIEKNQHS 275
            L  + Q S
Sbjct: 517 NLAHRTQES 525