Pairwise Alignments

Query, 362 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 555 a.a., Methyl-accepting chemotaxis protein CtpH from Pseudomonas putida KT2440

 Score =  102 bits (253), Expect = 3e-26
 Identities = 67/233 (28%), Positives = 119/233 (51%), Gaps = 10/233 (4%)

Query: 17  KLLEQQRRYEVEIEELKNMARENEAMQQQSRQNTDLYSDVIACQNQGGEMLNAVRDGIAS 76
           +L +  +  E    +L+++A +         Q TD    V    ++       V    A 
Sbjct: 279 RLQDNAQELEGASGQLRSIAGDMARGTHDQFQRTD---QVATAMHEMSATAQEVARHAAE 335

Query: 77  SAEILTEEKESLSELDKIFDQTRVAIVNLGNRATYINKQATSSMQAVTELNSTTSSINQF 136
           +A    +   S    +++  QT + I+ L      +N++   +   + +L   ++ I + 
Sbjct: 336 AARAADDADHSAQAGEQVMQQT-IDIIGL------VNREIAGTATVIRDLEHDSTRIGKV 388

Query: 137 VAAIQGISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRQLASKAHEASSQIEKLVKQI 196
           +  I+GI+EQTNLLALNAAIEAARAGEAGRGFAVVADEVR LA +   + ++I ++++ +
Sbjct: 389 LEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTAASIAEIHQIIEAV 448

Query: 197 VTQASNIKEIVHNNQNSALDVASSSTQIGQVVEDVLQRSNNMQQVIHNAATAS 249
            + A    + + + Q  + + A    Q GQ+++ + Q    ++ +    ATA+
Sbjct: 449 QSGAVEAVKAIESGQQRSQEGAEQVEQAGQMLQRITQAVEAIRDMNRQIATAA 501