Pairwise Alignments

Query, 362 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 521 a.a., putative aerotaxis receptor from Pseudomonas putida KT2440

 Score =  108 bits (269), Expect = 4e-28
 Identities = 86/277 (31%), Positives = 127/277 (45%), Gaps = 18/277 (6%)

Query: 24  RYEVEIEELKNMARENEAMQQQS-----RQNTDLYSDVIACQNQGGEMLNAVRDGIASSA 78
           R +   E L + AR+++A+  +S     RQ  +    V A  NQ       V + +  +A
Sbjct: 245 RLQDSAEHLSDQARQSDALAHKSSTGLERQRVET-EQVAAAVNQMAATTQEVANHVQRTA 303

Query: 79  EILTEEKESLSELDKIFDQTRVAIVNLGNRATYINKQATSSMQAVTELNSTTSSINQFVA 138
           +   E     S+  +I  +TR AI  L       +     + Q VT+L   +  I   V 
Sbjct: 304 DATQEANRLTSQGRQIAGETREAIERL-------SAAVGETGQTVTQLAKDSDEIGGVVD 356

Query: 139 AIQGISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRQLASKAHEASSQIEKLVKQIVT 198
            I+GI++QTNLLALNAAIEAARAGE GRGFAVVADEVRQLA +  E++ QI  L+ ++  
Sbjct: 357 VIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTAESTGQIHGLIAKLQQ 416

Query: 199 QASNIKEIVHNNQNSALDVASSSTQIGQVVEDVLQRSNNMQQVIHNAATASFLNTTKLDH 258
            ASN    +      A +      Q  + +  + +   N+  +    A A+   T   D 
Sbjct: 417 TASNAVLTMETGHRQAQEGVDRVMQADEALVGISEAVANITDMATQIAAATEEQTAVADE 476

Query: 259 AVWKSNVY-----QLIEKNQHSHGVNSHTECRLGQWY 290
                +       Q  E+ QHS  ++       G  Y
Sbjct: 477 ISRNISTIAELADQTAEQAQHSALLSEELTSTAGSQY 513