Pairwise Alignments

Query, 362 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 624 a.a., Methyl-accepting chemotaxis protein PctA from Pseudomonas putida KT2440

 Score =  106 bits (264), Expect = 2e-27
 Identities = 74/224 (33%), Positives = 116/224 (51%), Gaps = 20/224 (8%)

Query: 32  LKNMARENEAMQQQSRQNTDLYSDVIACQNQGGEMLNAVRDGIA------SSAEILTEEK 85
           L+ ++  N +M     Q+    S V A  N+ G     +    A      SSA +L EE 
Sbjct: 361 LRVISASNSSMTNSDEQSNRTNS-VAAAINELGAAAQEIAGNAAQASQHASSARLLAEEG 419

Query: 86  ESLSELDKIFDQTRVAIVNLGNRATYINKQATSSMQAVTELNSTTSSINQFVAAIQGISE 145
           + + E +       +A +N       ++    +S   +  LNS T +I Q +  I  IS+
Sbjct: 420 QQVVERN-------IAAMNR------LSDLIVTSSAHIETLNSKTVNIGQILEVITSISQ 466

Query: 146 QTNLLALNAAIEAARAGEAGRGFAVVADEVRQLASKAHEASSQIEKLVKQIVTQASNIKE 205
           QTNLLALNAAIEAARAGEAGRGFAVVADEVR LA +  E++ Q++ +++++   A    +
Sbjct: 467 QTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAQQVQTMIEELQVGARESVD 526

Query: 206 IVHNNQNSALDVASSSTQIGQVVEDVLQRSNNMQQVIHNAATAS 249
            +  +Q  + D    + Q G+ ++ V  R   +  +  + ATA+
Sbjct: 527 TMEQSQRHSQDSMQIANQAGERLDSVTVRIGEIDGMNQSVATAT 570



 Score = 38.1 bits (87), Expect = 7e-07
 Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 15/134 (11%)

Query: 14  LKQKLLEQQRRYEVEIEELKNMARENEAMQQQSRQNTDLYSDVIACQNQGGEMLNAVR-- 71
           L  +  E  ++ +  IEEL+  ARE+    +QS++++    D +   NQ GE L++V   
Sbjct: 499 LAHRTQESAQQVQTMIEELQVGARESVDTMEQSQRHS---QDSMQIANQAGERLDSVTVR 555

Query: 72  ----DGIASSAEILTEEKESLSELDKIFDQTRVAIVNLGNRATYINKQATSSMQAVTELN 127
               DG+  S    TEE+ ++ E   +     +  +N+ N+    N QAT  ++A ++L 
Sbjct: 556 IGEIDGMNQSVATATEEQTAVVEAINM----DINEINMLNQEGVENLQAT--LRACSDLE 609

Query: 128 STTSSINQFVAAIQ 141
                +   V + +
Sbjct: 610 QQAGRLKHLVGSFR 623