Pairwise Alignments

Query, 362 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 645 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score = 96.3 bits (238), Expect = 2e-24
 Identities = 70/249 (28%), Positives = 128/249 (51%), Gaps = 15/249 (6%)

Query: 3   FNSRLKAENEALKQKLL--EQQRRYEVEIEELKNMARENEAMQQQSRQNTDLYSDVIACQ 60
           FN  L ++   + + L   E+ RR   ++ ++ +   E    QQ+    T++ +  +   
Sbjct: 356 FNRFLDSQRSLIGEVLSTSERLRRAVEQVTQVVDNTAERSGRQQEM---TEMVATAVH-- 410

Query: 61  NQGGEMLNAVRDGIASSAEILTEEKESLSELDKIFDQTRVAIVNLGNRATYINKQATSSM 120
               EM   V+D   ++ +     + +  E  +  +  + +I  +   +  I K A    
Sbjct: 411 ----EMGLTVQDIARNAGDAAQASQSARDEALQAREVVQRSIRGIEGMSGDIGKAA---- 462

Query: 121 QAVTELNSTTSSINQFVAAIQGISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRQLAS 180
            AV++L    +S+++ +A I+ ISEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA 
Sbjct: 463 DAVSQLADEVASVDEVLAVIRSISEQTNLLALNAAIEAARAGEMGRGFAVVADEVRTLAR 522

Query: 181 KAHEASSQIEKLVKQIVTQASNIKEIVHNNQNSALDVASSSTQIGQVVEDVLQRSNNMQQ 240
           +   ++ +++++++++   A +    +   Q +      SS + G  +  +  +  ++  
Sbjct: 523 RTQLSTDEVQQMIQRLKLGAGSAVSSMQAGQQATGSGVESSQRTGASLSAITDQVEHISD 582

Query: 241 VIHNAATAS 249
           + H  ATA+
Sbjct: 583 MNHQVATAT 591