Pairwise Alignments

Query, 1074 a.a., carbamoyl-phosphate synthase, large subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 453 a.a., acetyl-CoA carboxylase from Pseudomonas simiae WCS417

 Score = 66.6 bits (161), Expect = 4e-15
 Identities = 68/327 (20%), Positives = 129/327 (39%), Gaps = 52/327 (15%)

Query: 587 ALREDGYETIMVNCNPETVSTDYDTSDR-LYFEP-------VTLEDVLEIVRIEKPKGVI 638
           A +E+G +T+ V    +T       +D  +   P       + + +++    +    G+ 
Sbjct: 26  ACKEEGIKTVAVYSTADTELMHVKLADESICIGPPLATNSYLKVSNIIAAAEVTGADGIH 85

Query: 639 VQYGGQTP-LKLARALEAAGVPIIGTSPDAIDRAEDRERFQQA--------IQRLEMKQP 689
             YG        A  +E +G   IG   + I    D+   + A        +   +   P
Sbjct: 86  PGYGFLAENADFAEQVEKSGFAFIGPKAETIRLMGDKVSAKDAMIAAGVPTVPGSDGPLP 145

Query: 690 ENDTVTTVEGAVIAAERIGYPLVVRPSYVLGGRAMEIVYDQQDLLRYFNEAVSVSNA--- 746
           E++     E A+     +GYP++++ +   GGR M +V+ ++DL+    +  S + A   
Sbjct: 146 EDE-----ETALRIGREVGYPVIIKAAGGGGGRGMRVVHKEEDLIEAAKQTRSEAGAWFG 200

Query: 747 -SPVLLDHFLDDAIEVDIDAVCDGETVVIGAIMEHIEQAGVHSGDSGCSL---------- 795
              V L+ +L +   V++  + DG            +   +H GD  CSL          
Sbjct: 201 NPMVYLEKYLTNPRHVEVQVLSDG------------QGHAIHLGDRDCSLQRRHQKVLEE 248

Query: 796 -PPYTLSQEIQDRMRVQVGKLAMELGVVGLMNVQFAVKNNEIYMIEVNPRAARTVPFVSK 854
            P   L ++ +  +  +  K  +++   G    +F  +N   Y IE+N R     P    
Sbjct: 249 APAPGLDEKARQEVLARCVKACIDINYRGAGTFEFLYENGRFYFIEMNTRVQVEHPVSEM 308

Query: 855 ATGVPLAKIAARVMAGQSLKAQNFTQE 881
            TG+ + K    + AG  L   +FTQ+
Sbjct: 309 VTGIDIVKEMLSIAAGNPL---SFTQD 332



 Score = 52.0 bits (123), Expect = 1e-10
 Identities = 74/325 (22%), Positives = 127/325 (39%), Gaps = 35/325 (10%)

Query: 35  KALREEGYRVILVNSNPATIMTDPEMADATY-----IEPIQWEVVRNIIAKER---PDAI 86
           +A +EEG + + V S   T +   ++AD +      +    +  V NIIA       D I
Sbjct: 25  RACKEEGIKTVAVYSTADTELMHVKLADESICIGPPLATNSYLKVSNIIAAAEVTGADGI 84

Query: 87  LPTMGGQTA-LNCALELEAKGVLAEFNVEMIGATADAIDKAEDRSRFDKAMKSIGLECPR 145
            P  G      + A ++E  G         IG  A+ I    D+     AM + G+    
Sbjct: 85  HPGYGFLAENADFAEQVEKSGFA------FIGPKAETIRLMGDKVSAKDAMIAAGVPTVP 138

Query: 146 AG---IAHSMEEAYGVLEQVGFPCIIRPSFTMGGSGGGIAYNKEEFEEICSQGLDLSPT- 201
                +    E A  +  +VG+P II+ +   GG G  + + +E+  E   Q    +   
Sbjct: 139 GSDGPLPEDEETALRIGREVGYPVIIKAAGGGGGRGMRVVHKEEDLIEAAKQTRSEAGAW 198

Query: 202 ---KELLIDESLIGWKEYEMEVVRDRNDNCIIV----CSIENFDPMGVHTGDSITVAPAQ 254
                + +++ L   +  E++V+ D   + I +    CS++            +  APA 
Sbjct: 199 FGNPMVYLEKYLTNPRHVEVQVLSDGQGHAIHLGDRDCSLQR------RHQKVLEEAPAP 252

Query: 255 TLTDKEYQIMRNASMAVLREIGVETGGSNVQFGINPKDGRMVIIEMNPRVSRSSALASKA 314
            L +K  Q +    +    +I     G+   F    ++GR   IEMN RV     ++   
Sbjct: 253 GLDEKARQEVLARCVKACIDINYRGAGT---FEFLYENGRFYFIEMNTRVQVEHPVSEMV 309

Query: 315 TGFPIAKIAAKLAVGFTLDELMNDI 339
           TG  I K    +A G  L    +D+
Sbjct: 310 TGIDIVKEMLSIAAGNPLSFTQDDV 334