Pairwise Alignments

Query, 1074 a.a., carbamoyl-phosphate synthase, large subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 471 a.a., pyruvate carboxylase subunit A from Pseudomonas putida KT2440

 Score = 71.6 bits (174), Expect = 1e-16
 Identities = 79/352 (22%), Positives = 149/352 (42%), Gaps = 46/352 (13%)

Query: 7   IKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATY- 65
           IK ILI   G I +           +  +A  E G R + + S+        + AD  + 
Sbjct: 2   IKKILIANRGEIAV-----------RIVRACAEMGIRSVAIFSDADRHALHVKRADEAHS 50

Query: 66  --IEPIQWEV----VRNIIAKERPDAILPTMGGQTALNCALELEAKGVLAEFNVEMIGAT 119
              EP+   +    + N+  +   DA+ P  G  +        E   + AE  ++ IG  
Sbjct: 51  IGAEPLAGYLNPRKLVNLAVETGCDALHPGYGFLSE-----NAELAEICAERGIKFIGPA 105

Query: 120 ADAIDKAEDRSRFDKAMKSIGLECPRA--GIAHSMEEAYGVLEQVGFPCIIRPSFTMGGS 177
           AD I +  D++   + M + G+       G    + EA    +++G+P +++   T GG 
Sbjct: 106 ADVIRRMGDKTEARRTMIAAGVPVTPGTEGNVADIHEALSEGDRIGYPVMLKA--TSGGG 163

Query: 178 GGGI--AYNKEEFEE----ICSQGLDLSPTKELLIDESLIGWKEYEMEVVRDRNDNCIIV 231
           G GI    ++EE E+    + S+      + E+ +++ ++  K  E +++ D   N + +
Sbjct: 164 GRGIRRCNSREELEQNFPRVISEATKAFGSAEVFLEKCIVNPKHIEAQILGDSFGNVVHL 223

Query: 232 ----CSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFG 287
               CSI+            I +AP+  LT ++   + + ++   + +  E  G+ V+F 
Sbjct: 224 FERDCSIQR------RNQKLIEIAPSPQLTPEQRAYIGDLAVRAAKAVNYENAGT-VEFL 276

Query: 288 INPKDGRMVIIEMNPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELMNDI 339
           +   DG +  +EMN RV     +  + TG  I +   ++A G  L     DI
Sbjct: 277 L--ADGEVYFMEMNTRVQVEHTITEEITGIDIVREQIRIASGLPLSVKQEDI 326



 Score = 51.6 bits (122), Expect = 1e-10
 Identities = 52/242 (21%), Positives = 103/242 (42%), Gaps = 21/242 (8%)

Query: 648 KLARALEAAGVPIIGTSPDAIDRAEDRERFQQAI--QRLEMKQPENDTVTTVEGAVIAAE 705
           +LA      G+  IG + D I R  D+   ++ +    + +       V  +  A+   +
Sbjct: 89  ELAEICAERGIKFIGPAADVIRRMGDKTEARRTMIAAGVPVTPGTEGNVADIHEALSEGD 148

Query: 706 RIGYPLVVRPSYVLGGRAMEIVYDQQDLLRYFNEAVSVSNASPVLLDHFLDDAIEVDIDA 765
           RIGYP++++ +   GGR +     +++L + F   +S +  +    + FL+  I V+   
Sbjct: 149 RIGYPVMLKATSGGGGRGIRRCNSREELEQNFPRVISEATKAFGSAEVFLEKCI-VNPKH 207

Query: 766 VCDGETVVIGAIMEHIEQAGVHSGDSGCS-------LPPYTLSQEIQDRMRVQVGKLAME 818
           +   E  ++G    ++    VH  +  CS       L     S ++    R  +G LA+ 
Sbjct: 208 I---EAQILGDSFGNV----VHLFERDCSIQRRNQKLIEIAPSPQLTPEQRAYIGDLAVR 260

Query: 819 LG-VVGLMN---VQFAVKNNEIYMIEVNPRAARTVPFVSKATGVPLAKIAARVMAGQSLK 874
               V   N   V+F + + E+Y +E+N R         + TG+ + +   R+ +G  L 
Sbjct: 261 AAKAVNYENAGTVEFLLADGEVYFMEMNTRVQVEHTITEEITGIDIVREQIRIASGLPLS 320

Query: 875 AQ 876
            +
Sbjct: 321 VK 322