Pairwise Alignments

Query, 1074 a.a., carbamoyl-phosphate synthase, large subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 451 a.a., acetyl-CoA carboxylase - biotin carboxylase subunit from Pseudomonas putida KT2440

 Score = 67.0 bits (162), Expect = 3e-15
 Identities = 64/255 (25%), Positives = 105/255 (41%), Gaps = 43/255 (16%)

Query: 650 ARALEAAGVPIIGTSPDAIDRAEDRERFQQAIQRLEMKQ--------PENDTVTTVEGAV 701
           A  +E +G   IG   D I    D+   + A+ +  +          PE++ V     A+
Sbjct: 95  AEQVEKSGFAFIGPKADTIRLMGDKVSAKDAMIKSGVPTVPGSDGPLPEDEEV-----AL 149

Query: 702 IAAERIGYPLVVRPSYVLGGRAMEIVYDQQDLLRYFN----EAVSVSNASPVLLDHFLDD 757
             A  +GYP++++ +   GGR M +V+ ++DL+        EA +      V L+ FL +
Sbjct: 150 AIARDVGYPVIIKAAGGGGGRGMRVVHKEEDLISSAKLTRTEAGAAFGNPMVYLEKFLTN 209

Query: 758 AIEVDIDAVCDGETVVIGAIMEHIEQAGVHSGDSGCSLP-------PYTLSQEIQDRMRV 810
              V++  + DG+   I            H GD  CSL            +  I ++ R 
Sbjct: 210 PRHVEVQVLSDGQGNAI------------HLGDRDCSLQRRHQKVLEEAPAPGIDEKARQ 257

Query: 811 QVGK----LAMELGVVGLMNVQFAVKNNEIYMIEVNPRAARTVPFVSKATGVPLAKIAAR 866
           +V K      +E+G  G    +F  +N   Y IE+N R     P     TG+ + K    
Sbjct: 258 EVFKRCVDACIEIGYRGAGTFEFLYENGRFYFIEMNTRVQVEHPVSEMVTGIDIVKEMLS 317

Query: 867 VMAGQSLKAQNFTQE 881
           + AG  L   +F QE
Sbjct: 318 IAAGNKL---SFRQE 329



 Score = 48.5 bits (114), Expect = 1e-09
 Identities = 57/237 (24%), Positives = 92/237 (38%), Gaps = 24/237 (10%)

Query: 116 IGATADAIDKAEDRSRFDKAMKSIGLECPRAG---IAHSMEEAYGVLEQVGFPCIIRPSF 172
           IG  AD I    D+     AM   G+         +    E A  +   VG+P II+ + 
Sbjct: 106 IGPKADTIRLMGDKVSAKDAMIKSGVPTVPGSDGPLPEDEEVALAIARDVGYPVIIKAAG 165

Query: 173 TMGGSGGGIAYNKEEFEEICSQGLDLSPTKE------LLIDESLIGWKEYEMEVVRDRND 226
             GG G  + + +E+   I S  L  +          + +++ L   +  E++V+ D   
Sbjct: 166 GGGGRGMRVVHKEEDL--ISSAKLTRTEAGAAFGNPMVYLEKFLTNPRHVEVQVLSDGQG 223

Query: 227 NCIIV----CSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGS 282
           N I +    CS++            +  APA  + +K  Q +    +    EIG    G+
Sbjct: 224 NAIHLGDRDCSLQR------RHQKVLEEAPAPGIDEKARQEVFKRCVDACIEIGYRGAGT 277

Query: 283 NVQFGINPKDGRMVIIEMNPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELMNDI 339
              F    ++GR   IEMN RV     ++   TG  I K    +A G  L     D+
Sbjct: 278 ---FEFLYENGRFYFIEMNTRVQVEHPVSEMVTGIDIVKEMLSIAAGNKLSFRQEDV 331