Pairwise Alignments

Query, 357 a.a., DNA-damage-inducible protein P (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 369 a.a., Nucleotidyltransferase/DNA polymerase involved in DNA repair from Kangiella aquimarina DSM 16071

 Score =  342 bits (876), Expect = 1e-98
 Identities = 176/335 (52%), Positives = 234/335 (69%), Gaps = 1/335 (0%)

Query: 1   MRKIIHVDMDCYFAAVEMRDFPEYRGKPLAVGGSRERRGVISTCNYEARRFGVRSAMATA 60
           +RKIIHVDMDCY+AA+EMRD P  + +P+AVGGS ++RGVI+TCNYEAR +GVRSAM +A
Sbjct: 11  IRKIIHVDMDCYYAAIEMRDEPSLKNQPVAVGGSPDKRGVIATCNYEARSYGVRSAMPSA 70

Query: 61  YAQKLCPDLILVPGRMQVYKDVSSQIRAIFSRYTELIEPLSLDEAYLDVSDCKLHKGSAT 120
           YA++LCP L++V      Y+  S  IR IF++YT+LIEPLSLDEAYLDV++C  +KGSAT
Sbjct: 71  YARRLCPGLVIVHPNFDKYRHDSKVIREIFAQYTDLIEPLSLDEAYLDVTECTEYKGSAT 130

Query: 121 LIAEAIRRDILAETGLTASAGVAPVKFLAKVASDLNKPNGQYVIPPDKVPEFIRTLSLRQ 180
            IA+AIR  I  +  LTASAGVAP KFLAK+ASD NKPNGQ+VI P++V +F++ L + +
Sbjct: 131 FIAQAIRYQIFEKLKLTASAGVAPNKFLAKIASDWNKPNGQFVITPEEVDDFVKQLPVAK 190

Query: 181 IPGVGKVTAEKLSSLGLNTCGDVQTYPKQELITRFGKFGAVLIERAQGIDDRGLSVSRER 240
           I GVGK T EKL  +G+  C +++      L   FG FG  L E ++GID R +     R
Sbjct: 191 IHGVGKKTTEKLHRMGIENCKELREIDLLTLSKTFGSFGQRLYELSRGIDQRPVITHYPR 250

Query: 241 KSVGVETTLAQDIYTLEQCQQVMPGLIQELSTRLSRSAKDRQIHKQVVKLKFSDFKQTTI 300
           KS+ VE T  QD+ TLE C   +P L+Q L  R++RS     I+K   KLKFSDF  TT+
Sbjct: 251 KSLSVENTYDQDLITLEDCLDELPHLLQTLKRRVARSGVGAPINKLFAKLKFSDFTATTV 310

Query: 301 EHRSNDVSVMMFYELLAQAIARQDGRGIRLLGVAV 335
           E  S  ++  +FYEL+ +   R+  + +RLLG+ V
Sbjct: 311 ERTSFGINDDLFYELMEEGFHRRQ-KTVRLLGIGV 344