Pairwise Alignments

Query, 418 a.a., NADH:ubiquinone oxidoreductase, Na translocating, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 341 a.a., NADH oxidase from Ralstonia solanacearum UW163

 Score = 78.6 bits (192), Expect = 3e-19
 Identities = 74/340 (21%), Positives = 136/340 (40%), Gaps = 56/340 (16%)

Query: 84  GSCGQCRVVVKSGGGDILPTEL--DHISKGDARKGCRLSCQVNVKNDMEIELDEEIF--- 138
           G+CG CR   ++G  D+  +    D +S  +A +G  L+CQ    +D  +++        
Sbjct: 43  GACGTCRCRCEAGRYDLPASSYIEDALSAEEAAQGYILACQTRPTSDCVVKVAASSTACK 102

Query: 139 -GIKKWECAVISNDNKATFIKELKLQIPDGESVPFRAGGYIQIEAPAHHVKYADFDVPAK 197
            G+  +   + S D  +       + + D  S+ F  G Y+ +E P   +          
Sbjct: 103 TGVATFNGTIASVDRLSDSTIGFAIDLDDAGSLSFLPGQYVNVEIPGTGLT--------- 153

Query: 198 YRGDWEHFGFFKLESKVDEETIRAYSMANYPEEFGIIMLNVRIATPPPRNLTLPCGKMSS 257
                                 R+YS ++ P   G     VR          +P G+MS 
Sbjct: 154 ----------------------RSYSFSS-PPGAGRAAFVVR---------NVPDGRMSR 181

Query: 258 YIWS-LKAGDKVTISGPFGEFFAKDTDAEMVFIGGGAGMAPMRSHIFDQLKRLKSKRKMS 316
           Y+    + G ++  +GP+G F+ ++     +F+ GG G+AP  S + D L    +++ + 
Sbjct: 182 YLAEEARPGQRIAFAGPYGSFYLREVTRPALFLAGGTGIAPFLS-MLDVLAAEGTRQPVR 240

Query: 317 FWYGARSKREMFYVEDFDGLAAENDNFVWHVALSDPQPEDNWDGYTGFIHNVLYENYLKN 376
             +G     ++  +   D + A    F + V +  P   D+     G++   +   +L  
Sbjct: 241 MVFGVTHDIDLVALAQLDAVKARLPQFDYRVCVVAP---DSAQPRKGYVTQHVEPAWLNG 297

Query: 377 HDAPEDCEFYMCGPPMMNAAVIGMLKNLGVEDENILLDDF 416
            D     + Y+CGP  M  AV G L+  GV   + L + F
Sbjct: 298 GDV----DVYLCGPVAMVEAVRGWLQQTGVTPASFLYEKF 333