Pairwise Alignments

Query, 418 a.a., NADH:ubiquinone oxidoreductase, Na translocating, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 328 a.a., naphthalene 1,2-dioxygenase from Ralstonia solanacearum UW163

 Score = 80.5 bits (197), Expect = 7e-20
 Identities = 90/369 (24%), Positives = 154/369 (41%), Gaps = 60/369 (16%)

Query: 54  EKAITTGAGGKLLGVLANNGIFVSSACGGGGSCGQCRVVVKSGGGDILPTELDHISKGDA 113
           ++ ++  AG  LL VL  + I +S +C  G  CG CR  V SG  +++ T    I+   A
Sbjct: 9   QRIVSARAGDNLLEVLRTHQIPISYSCMAG-RCGTCRCRVLSG--NVVATGGTEINGPCA 65

Query: 114 RKGCRLSCQVNVKNDMEIELDEE----IFGIKKWECAVISNDNKATFIKELKLQIPDGES 169
                L+CQ  +  D  IEL E     +   +  +  V++ ++    IK ++L +   + 
Sbjct: 66  PGQTVLACQTTLIEDCAIELPEVDEIVVHPARIIKSKVVAIEDMTHDIKRIRLAL--AKP 123

Query: 170 VPFRAGGYIQIEAPAHHVKYADFDVPAKYRGDWEHFGFFKLESKVDEETIRAYSMANYPE 229
           + F  G Y  ++    HV                                R YSMA   +
Sbjct: 124 LAFSPGQYATLQFTPRHV--------------------------------RPYSMA-VAD 150

Query: 230 EFGIIMLNVRIATPPPRNLTLPCGKMSSYIWS-LKAGDKVTISGPFGEFFAKDTDAE-MV 287
           E   +  +VR+         +P G+++SY+ S LK GD+V + GP G  + +  +A+ ++
Sbjct: 151 EGQALEFHVRL---------VPGGRVTSYVASTLKVGDEVRVGGPLGTAYLRRKNADPVI 201

Query: 288 FIGGGAGMAPMRSHIFDQLKRLKSKRKMSFWYGARSKREMFYVEDFDGLAAENDNFVWHV 347
            I GG G+AP+ S I   +     +  +  ++G R+  +++     D L     N   HV
Sbjct: 202 CIAGGTGLAPILS-ILRGMANAGMRNPVHVYFGVRAPADVYGTHWLDALRERLPNLHAHV 260

Query: 348 ALSDPQPEDNWDGYTGFIHNVLYENYLKNHDAPEDCEFYMCGPPMMNAAVIGMLKNLGVE 407
            ++    E        F   V+ E    +         Y+ G P+M  A   +L+  GV 
Sbjct: 261 VVATSNAE------ARFRSGVVTEAVASDWPDLAGWRAYLAGAPVMVDAASLLLRQRGVP 314

Query: 408 DENILLDDF 416
            E+I  D F
Sbjct: 315 AEHIYADAF 323