Pairwise Alignments

Query, 418 a.a., NADH:ubiquinone oxidoreductase, Na translocating, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 377 a.a., FAD-binding oxidoreductase from Paraburkholderia sabiae LMG 24235

 Score = 73.2 bits (178), Expect = 1e-17
 Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 7/215 (3%)

Query: 205 FGFFKLESKVDEETIRAYSMANYPEEFGIIMLNVRIATPPPRNLTLPCGKMSSYIWS-LK 263
           F   +L     E  +R YS++  P +     ++V+  +        P G+ SSY+   + 
Sbjct: 52  FVTLRLPISSGERLLRTYSLSGDPADATRWRISVKRESARD---DAPEGRGSSYLHEHVH 108

Query: 264 AGDKVTISGPFGEFFA-KDTDAEMVFIGGGAGMAPMRSHIFDQLKRLKSKRKMSFWYGAR 322
            GD++ ++GP G F    DT   +V + GG G+ P+ S +  +L+ +   R++ F +   
Sbjct: 109 VGDELELAGPLGAFVCGSDTTRPVVLMSGGVGLTPLVS-MLHRLRAMDGTRRVHFIHACE 167

Query: 323 SKREMFYVEDFDGLAAENDNFVWHVALSDPQPEDNWDGYTGFIHNVLYENYLKNHDAPED 382
           +     +  + + +AA + N + H     P  ED   G+      +L    L++    +D
Sbjct: 168 NGAVHAFRREVEAVAAAHPNVLAHFCYRQPLEEDRIAGHF-HSEGLLSRETLQSLLPLDD 226

Query: 383 CEFYMCGPPMMNAAVIGMLKNLGVEDENILLDDFG 417
            E Y+CGPP    A   +L++LGV  E I  + FG
Sbjct: 227 YEVYLCGPPAFMQANWRLLRSLGVARERIHYEFFG 261