Pairwise Alignments

Query, 418 a.a., NADH:ubiquinone oxidoreductase, Na translocating, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 333 a.a., 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases / CDP-6-deoxy-delta-3,4-glucoseen reductase-like from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  101 bits (252), Expect = 3e-26
 Identities = 95/368 (25%), Positives = 165/368 (44%), Gaps = 57/368 (15%)

Query: 56  AITTGAGGKLLGVLANNGIFVSSACGGGGSCGQCRVVVKSGGGDILPTELDHISKGDARK 115
           AI   AG  +L  +   G  +  +C  G  C  C+  V SG  +        ++  +   
Sbjct: 4   AIPCAAGQTVLDAVRQAGYEMPFSCNSG-VCASCKGRVVSGRVNPGAAGEHTLTADEIAH 62

Query: 116 GCRLSCQVNVKNDMEIELDE----EIFGIKKWECAVISNDNKATFIKELKLQIPDGESVP 171
           G  L CQ     D+EIE  +    +    ++    V+  D  A+ +  LKL+ P GE V 
Sbjct: 63  GQVLFCQARPLTDIEIEPRQIEKTDPNARRQLAARVMRIDFLASDVARLKLRFPAGEKVK 122

Query: 172 FRAGGYIQIEAPAHHVKYADFDVPAKYRGDWEHFGFFKLESKVDEETIRAYSMANYPEEF 231
           F+AG Y+Q+  P                                +   R++SMAN P + 
Sbjct: 123 FKAGQYLQVLLP--------------------------------DGQRRSFSMANPPHQN 150

Query: 232 GIIMLNVRIATPPPRNLTLPCGKMSSYI-WSLKAGDKVTISGPFGEFFAKD-TDAEMVFI 289
               L++R+         L  G  S ++   LK GD + +  P G+F  ++ + A +V +
Sbjct: 151 DGAELHIRM---------LEGGAFSHWLAHDLKVGDHLRVELPHGDFHLREGSTAPIVML 201

Query: 290 GGGAGMAPMRSHIFDQLKRLKSKRKMSFWYGARSKREMFYVEDFDGLAAENDNFVWHVAL 349
             G G AP++S + D L+R ++ R+++ ++GAR++++++ +E   G   E     +   L
Sbjct: 202 ASGTGFAPIKSMVEDGLRRGQA-REIALYWGARTEKDLYLLELARGW-GEQAGLRFVPVL 259

Query: 350 SDPQPEDNWDGYTGFIHNVLYENYLKNHDAPEDCEFYMCG-PPMMNAAVIGMLKNLGVED 408
           S  +PE  W G TGF+H  +    L++HD+    + Y CG P M++AA    ++  G+  
Sbjct: 260 S--EPEAGWSGRTGFVHQAV----LQDHDSLAGHQVYACGAPAMVSAARSDFVETRGLPP 313

Query: 409 ENILLDDF 416
           +    D F
Sbjct: 314 DAFFCDAF 321