Pairwise Alignments

Query, 202 a.a., NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 203 a.a., NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  241 bits (614), Expect = 9e-69
 Identities = 122/199 (61%), Positives = 156/199 (78%), Gaps = 2/199 (1%)

Query: 6   SLLIRSVFIENMALAFFLGMCTFLAVSKKVTTAMGLGIAVVVVLTISVPANQVIYQGLLA 65
           SL IRS+FI+NM  A+FLGMC+FLAVSKKV+TA+GLG AV+ VLTI+VP N ++ + +L 
Sbjct: 5   SLGIRSIFIDNMVFAYFLGMCSFLAVSKKVSTALGLGAAVIFVLTITVPLNWLLNEFVLK 64

Query: 66  PGALAWAGAPEA--DLSFLKFITFIGVIAALVQILEMALDKYFPPLYNALGIFLPLITVN 123
            GAL++ G   A  DL+FL+FI FI +IAA+VQ++EM ++K+ P LY ALGIFLPLI VN
Sbjct: 65  EGALSFLGESFATIDLTFLRFIMFIAIIAAMVQLVEMVVEKFAPALYGALGIFLPLIAVN 124

Query: 124 CAIFGAVSFMVERDYKLGESLVFGFGSGVGWALAIVLMAGIREKLKYADVPNGLRGLGIT 183
           CAI G   FM +RDY L E+ V+GFGSG G+ LAIV +A IREKLKY++VPNGL+GLGIT
Sbjct: 125 CAILGGSLFMAQRDYTLAEAGVYGFGSGTGFFLAIVALAAIREKLKYSNVPNGLKGLGIT 184

Query: 184 FITAGLMALGFMSFSGVSL 202
            +  GLM + FMSF G+ L
Sbjct: 185 MLITGLMGIAFMSFMGIDL 203