Pairwise Alignments

Query, 202 a.a., NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 227 a.a., NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 53.1 bits (126), Expect = 4e-12
 Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 26/149 (17%)

Query: 23  LGMCTFLAVSK--KVTTAMGLGIAVVVV---LTISVPANQVIYQGLLAPGALAWAGAPEA 77
           LG+C+ LAV+   K T  M L +  V+V   LTIS+  N +  +                
Sbjct: 42  LGICSALAVTTQMKPTLVMALSVIFVIVMSNLTISIMRNTIPTR---------------- 85

Query: 78  DLSFLKFITFIGVIAALVQILEMALDKYFPPLYNALGIFLPLITVNCAIFGAVSFMVERD 137
               ++ I  + V+A LV ++   L  +   +Y  L +F+ LI  NC + G +      +
Sbjct: 86  ----VRIIVQLAVVATLVTLVNEILKAFAYDMYKELSVFVGLIITNCIVMGRLEAFALGN 141

Query: 138 YKLGESLVFGFGSGVGWALAIVLMAGIRE 166
            K  +S++ GFGS +G++  I+ +A  RE
Sbjct: 142 -KPYDSVLDGFGSALGYSWIILTVAFFRE 169