Pairwise Alignments

Query, 210 a.a., NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 211 a.a., NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit from Kangiella aquimarina DSM 16071

 Score =  301 bits (772), Expect = 4e-87
 Identities = 150/205 (73%), Positives = 174/205 (84%)

Query: 3   DAKELKQVLTGPIVNNNPIALQVLGVCSALAVTSKLETALVMALALTAVTAFSNLFISMI 62
           D +E K VL  PI NNNPIALQVLG+CSALAVTSKLETALVM+LALT V AFSNL IS+I
Sbjct: 4   DKQEAKSVLFSPIFNNNPIALQVLGICSALAVTSKLETALVMSLALTTVVAFSNLLISLI 63

Query: 63  RNHIPSSVRIIVQMTIIASLVIVVDQLLQAYAYQISKQLSVFVGLIITNCIVMGRAEAYA 122
           R  IPSS+RIIVQMTIIASLVI+VDQ+L+AYAY++SKQLSVFVGLIITNCIVMGRAEAYA
Sbjct: 64  RKQIPSSIRIIVQMTIIASLVILVDQVLKAYAYEVSKQLSVFVGLIITNCIVMGRAEAYA 123

Query: 123 MKTPPMMSFMDGIGNGLGYGAILLAVGFVRELFGNGSLFGVQILHKISDGGWYQPNGLLL 182
           MK  P MSF+DG+GNGLGY  +L+ VG +RELFG+G L    I   I+DGGWY  NGLL+
Sbjct: 124 MKNGPAMSFLDGLGNGLGYSVLLIIVGIIRELFGSGKLLDFTIFPTIADGGWYHTNGLLM 183

Query: 183 LPPSAFFLIGMLIWIIRTYKPEQVE 207
           LP S+FF+IG+LIW +RT+K +QVE
Sbjct: 184 LPASSFFIIGLLIWALRTWKTDQVE 208