Pairwise Alignments

Query, 210 a.a., NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 234 a.a., electron transport complex subunit E from Dickeya dianthicola ME23

 Score =  142 bits (359), Expect = 4e-39
 Identities = 78/190 (41%), Positives = 117/190 (61%), Gaps = 16/190 (8%)

Query: 18  NNPIALQVLGVCSALAVTSKLETALVMALALTAVTAFSNLFISMIRNHIPSSVRIIVQMT 77
           NN   +Q+LG+C  LAV+S    AL + LA T V   +N+ +S +R  +P  +RI + + 
Sbjct: 15  NNSALVQLLGLCPLLAVSSTATNALGLGLATTLVLICTNIAVSALRRWVPDEIRIPIYVL 74

Query: 78  IIASLVIVVDQLLQAYAYQISKQLSVFVGLIITNCIVMGRAEAYAMKTPPMMSFMDGIGN 137
           +IAS+V +V  L+ AYAY + + L +F+ LI+TNCIV+GRAEA+A K   M+S +DG+  
Sbjct: 75  LIASVVTIVQMLINAYAYGLYQSLGIFIPLIVTNCIVIGRAEAFASKNTVMLSALDGLFM 134

Query: 138 GLGYGAILLAVGFVRELFGNGSLF-GVQILHKISDGGWYQ-----------PNGLLLLPP 185
           GLG  + L  +G +RE+ GNG+LF G  +L     GGW +           P  L++LPP
Sbjct: 135 GLGATSALFVLGAIREILGNGTLFDGADLLL----GGWARVLRVEVVHMDSPFLLMILPP 190

Query: 186 SAFFLIGMLI 195
            AF  +GM++
Sbjct: 191 GAFIGLGMML 200