Pairwise Alignments

Query, 210 a.a., NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 234 a.a., electron transport complex subunit E from Dickeya dianthicola 67-19

 Score =  141 bits (356), Expect = 9e-39
 Identities = 77/192 (40%), Positives = 117/192 (60%), Gaps = 20/192 (10%)

Query: 18  NNPIALQVLGVCSALAVTSKLETALVMALALTAVTAFSNLFISMIRNHIPSSVRIIVQMT 77
           NN   +Q+LG+C  LAV+S    AL + LA T V   +N+ +S +R  +P  +RI + + 
Sbjct: 15  NNSALVQLLGLCPLLAVSSTATNALGLGLATTLVLICTNIAVSALRRWVPDEIRIPIYVL 74

Query: 78  IIASLVIVVDQLLQAYAYQISKQLSVFVGLIITNCIVMGRAEAYAMKTPPMMSFMDGIGN 137
           +IAS+V +V  L+ AYAY + + L +F+ LI+TNCIV+GRAEA+A K   M+S +DG+  
Sbjct: 75  LIASVVTIVQMLINAYAYGLYQSLGIFIPLIVTNCIVIGRAEAFASKNTVMLSALDGLFM 134

Query: 138 GLGYGAILLAVGFVRELFGNGSLFG--------------VQILHKISDGGWYQPNGLLLL 183
           GLG  + LL +G +RE+ GNG+LF               V+++H  S      P  L++L
Sbjct: 135 GLGATSALLVLGAIREILGNGTLFDGADLLLGRWARVLRVEVVHMDS------PFLLMIL 188

Query: 184 PPSAFFLIGMLI 195
           PP AF  +GM++
Sbjct: 189 PPGAFIGLGMML 200