Pairwise Alignments

Query, 444 a.a., NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 448 a.a., NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit from Kangiella aquimarina DSM 16071

 Score =  513 bits (1321), Expect = e-150
 Identities = 257/448 (57%), Positives = 334/448 (74%), Gaps = 4/448 (0%)

Query: 1   MITIKKGLELPIAGGPEQVIHNGPAIKHVATLGEEYIGLRPTMKIKVGDKVQKGQVIFED 60
           MI IKKGL+LPI G PEQ I  G  +K VA LGE+Y+G++PTM ++ GD V+KGQ+IFED
Sbjct: 1   MIKIKKGLDLPIEGQPEQTISAGATVKTVAILGEDYVGMKPTMHVQEGDVVKKGQLIFED 60

Query: 61  KKNPGVKYTALASGTILDINRGAQRVLQSVVIEV-EGNDSIAFAKYDATALDTLDAQLVR 119
           KK PGVKYTA A+GTI  INRG +R L SVV+EV +  ++++F K+    L  L  + + 
Sbjct: 61  KKTPGVKYTAPAAGTIKAINRGNKRKLLSVVVEVAQQEEAVSFNKFSPEQLSGLSREAIV 120

Query: 120 DNLIESGLWTALRTRPFSKVPAVDSSAAGIFVTAIDTQPHAADPVVVIREHKEDFANGLK 179
           + ++ESG+WTALR RP+SKVPA+D     IFV+A+DT P AADP V+I E  E F  GL 
Sbjct: 121 EQMVESGMWTALRKRPYSKVPAIDGETQAIFVSAMDTNPLAADPEVIISEQNEAFNFGLD 180

Query: 180 VLARLTEDKVYLCKAPGADIP-AANAQV--EEFAGIHPAGLVGTHIHFLLPASAKRTVWH 236
           +LA+L+ DKV++   P + +  ++NA+V  EEF+G HPAGLVGTHIHFL PAS  R VW+
Sbjct: 181 ILAQLSGDKVFVATRPNSSLTKSSNAKVKYEEFSGPHPAGLVGTHIHFLYPASMSRPVWY 240

Query: 237 VGYQDVIAIGQLFTTGQLHTERVVAIAGPKAAKPRLVRTVLGASMTELTAGETLAGNVRF 296
           +GYQDVIA+ +LF  G+LHT+RV+A+ G     PRL+RT +GAS+ EL A E    + R 
Sbjct: 241 IGYQDVIALAKLFIDGELHTDRVIALGGTMIKNPRLIRTRVGASLDELLANEENDADNRH 300

Query: 297 ISGSVLNGRTAIGPQGYLGRYHMQVSLLEEGTEKEFLGWVLPGANKFSITRAFLGHFSSS 356
           ISGSVL+G  AI  + YLGRYH QV+++ EG +KEF GW +PG++KFS+TRAF GH   +
Sbjct: 301 ISGSVLSGFNAIDARAYLGRYHNQVTVIREGRDKEFFGWAMPGSDKFSVTRAFFGHVFRN 360

Query: 357 RLFNMTTSTGGSDRAMVPIGNYERVMPLDILPTMLLRDLISGDFDGAVTLGALELDEEDL 416
           + FNMTT+TGGS+R+++PIGNYERVMPLDILPT LLR +++ D   A  LG LELDEEDL
Sbjct: 361 KRFNMTTTTGGSERSIMPIGNYERVMPLDILPTQLLRAIVTNDTVLAQELGCLELDEEDL 420

Query: 417 ALCTFVCPGKYDYGSYLRDCLDTIVREG 444
           ALCT+VCPGKY+YGS LR+ L  I +EG
Sbjct: 421 ALCTYVCPGKYEYGSILRENLTKIEKEG 448