Pairwise Alignments

Query, 377 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 374 a.a., 16S rRNA m(2)G 1207 methyltransferase / 23S rRNA m(2)G-1835 methyltransferase from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  233 bits (594), Expect = 6e-66
 Identities = 146/371 (39%), Positives = 208/371 (56%), Gaps = 10/371 (2%)

Query: 11  ELELFRYPASQESNLQAWDAADEHLINSLIEGGQIAVPTAII--NDSFGALSCALSRINP 68
           EL+L R P  Q+  LQA+DAADE+L+N + + G +++P+ ++  NDSFGAL+ +L+   P
Sbjct: 10  ELDLIRQPEQQDEPLQAFDAADEYLLNHVAQAG-LSLPSRVLVLNDSFGALAASLA---P 65

Query: 69  NWPLRVETDARTSFLGTEQNHHRNQLPMDNLQWFTSRDTLPKDVALVLMKLPKNLTYFAH 128
           +  +   TD+  +    E+N  RN +  D +    + + L      VL+++PK L     
Sbjct: 66  HATVISSTDSFLAAQALEKNLARNGMSYDAVPHIPASEALQGPFDWVLIRVPKTLALLEE 125

Query: 129 QLMRLSQILPAGCRVLVGAKAKSINSSLLALFAKHLGPANASLAWKKTRVITCISDG-KP 187
           QL+RL   L  G RV+  A  K +  S   L  +++GP  ASLA KK R++       + 
Sbjct: 126 QLIRLQGQLAPGARVIAAAMVKHLPRSAGDLLEEYVGPVQASLAVKKARLLFATPQPMEV 185

Query: 188 RALPNGITWNIPEFNLTISNLSNVFAANKLDIGARIMLDNLPQGKFNT-VVDLGCGNGVL 246
           R  P    + + E  + + N +NVF  + LDIG R  L +LP+      V DLGCGNGVL
Sbjct: 186 RTSPYPTRYRLEEPAIELLNHANVFCRDGLDIGTRAFLPHLPKNLGTARVADLGCGNGVL 245

Query: 247 GLRAAQLYPNADIHFIDDSEMAVASAKANWTMNQLAEGKGHFHWDDCMTHLPEDIEPDLV 306
            + +A   P A    +D+S MAV SA  NW    L +        D +  + E    D+V
Sbjct: 246 AIASALDNPQAHYTLVDESFMAVKSAAENWRAT-LGDRDVRVRAGDGL-EMQEPDSLDVV 303

Query: 307 LCNPPFHQGEAITDHIAWQMFLDARRRLKNGGILHIVGNRHLAYHVKLQRLFKNCTTVAS 366
           LCNPPFHQ + + D +AW+MFL AR  L  GG L+IVGNRHL YH KL RLF+    VA+
Sbjct: 304 LCNPPFHQQQVVGDFLAWRMFLQARAALVTGGALYIVGNRHLGYHTKLSRLFRGVEQVAA 363

Query: 367 NGKFVILQAQK 377
             KFVIL+A+K
Sbjct: 364 TPKFVILKARK 374