Pairwise Alignments

Query, 377 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 378 a.a., 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  270 bits (690), Expect = 5e-77
 Identities = 158/370 (42%), Positives = 224/370 (60%), Gaps = 11/370 (2%)

Query: 12  LELFRYPASQESN-LQAWDAADEHLINSLIEGGQIAVPTAIINDSFGALSCALSRINPNW 70
           L L R+P + + N L AW+AADE+L+  L E  +I  P  I+ND+FGALSCAL+  +P  
Sbjct: 11  LTLKRFPQTDDVNPLLAWEAADEYLLQQLDET-EIRGPVLILNDTFGALSCALAEHSPY- 68

Query: 71  PLRVETDARTSFLGTEQNHHRNQLPMDNLQWFTSRDTLPKDVALVLMKLPKNLTYFAHQL 130
                 D+  S LGT +N   N +   ++ +  S    P+   +VL+K+PK L     QL
Sbjct: 69  ---SIGDSYLSELGTRENLRHNGIAESSVTFLDSTADYPQAPGVVLIKVPKTLALLEQQL 125

Query: 131 MRLSQILPAGCRVLVGAKAKSINSSLLALFAKHLGPANASLAWKKTRVITC-ISDGKPRA 189
             L +++ A  R++ GAKA+ I++S L LF K LGP   +LAWKK R+I C  S  +   
Sbjct: 126 RALRKVVTAQTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFSHPQLAD 185

Query: 190 LPNGITWNIPEFNLTISNLSNVFAANKLDIGARIMLDNLPQGKFNTVVDLGCGNGVLGLR 249
            P  ++W + +   TI N +NVF+   LDIGAR  + +LP+     +VDLGCGNGV+GL 
Sbjct: 186 APQTLSWKLEDTGWTIHNHANVFSRTGLDIGARFFMQHLPENLDGEIVDLGCGNGVIGLS 245

Query: 250 AAQLYPNADIHFIDDSEMAVASAKANWTMNQLAEG--KGHFHWDDCMTHLPEDIEPDLVL 307
                P A++ F+D+S MAV S++ N   N L E   +  F  ++ ++ + E    + V 
Sbjct: 246 LLAKNPQANVVFVDESPMAVDSSRLNVETN-LPEAFERCEFMINNALSGV-EPFRFNAVF 303

Query: 308 CNPPFHQGEAITDHIAWQMFLDARRRLKNGGILHIVGNRHLAYHVKLQRLFKNCTTVASN 367
           CNPPFHQ  A+TD+IAW+MF  ARR LK  G L+IV NRHL Y  KL+++F NC T+A+N
Sbjct: 304 CNPPFHQKHALTDNIAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCATIATN 363

Query: 368 GKFVILQAQK 377
            KFVIL+A K
Sbjct: 364 NKFVILKAVK 373