Pairwise Alignments

Query, 377 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 378 a.a., 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG from Escherichia coli ECRC62

 Score =  278 bits (710), Expect = 2e-79
 Identities = 157/369 (42%), Positives = 226/369 (61%), Gaps = 9/369 (2%)

Query: 12  LELFRYPASQESN-LQAWDAADEHLINSLIEGGQIAVPTAIINDSFGALSCALSRINPNW 70
           L L R+PA+ + N LQAW+AADE+L+  L +  +I  P  I+ND+FGALSCAL+   P  
Sbjct: 11  LTLQRFPATDDVNPLQAWEAADEYLLQQL-DDTEIRGPVLILNDAFGALSCALAEHKPY- 68

Query: 71  PLRVETDARTSFLGTEQNHHRNQLPMDNLQWFTSRDTLPKDVALVLMKLPKNLTYFAHQL 130
                 D+  S L T +N   N +   ++++  S    P+   +VL+K+PK L     QL
Sbjct: 69  ---SIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQL 125

Query: 131 MRLSQILPAGCRVLVGAKAKSINSSLLALFAKHLGPANASLAWKKTRVITCISDGKPRA- 189
             L +++ +  R++ GAKA+ I++S L LF K LGP   +LAWKK R+I C  +  P A 
Sbjct: 126 RALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPPLAD 185

Query: 190 LPNGITWNIPEFNLTISNLSNVFAANKLDIGARIMLDNLPQGKFNTVVDLGCGNGVLGLR 249
            P  ++W +   + TI N +NVF+   LDIGAR  + +LP+     +VDLGCGNGV+GL 
Sbjct: 186 APQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLT 245

Query: 250 AAQLYPNADIHFIDDSEMAVASAKANWTMNQL-AEGKGHFHWDDCMTHLPEDIEPDLVLC 308
                P A + F+D+S MAVAS++ N   N   A  +  F  ++ ++ + E    + VLC
Sbjct: 246 LLDKNPQAKVVFVDESPMAVASSRMNVETNMPEALDRCEFMINNALSGV-EPFRFNAVLC 304

Query: 309 NPPFHQGEAITDHIAWQMFLDARRRLKNGGILHIVGNRHLAYHVKLQRLFKNCTTVASNG 368
           NPPFHQ  A+TD++AW+MF  ARR LK  G L+IV NRHL Y  KL+++F NCTT+A+N 
Sbjct: 305 NPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNN 364

Query: 369 KFVILQAQK 377
           KFV+L+  K
Sbjct: 365 KFVVLKTVK 373