Pairwise Alignments

Query, 226 a.a., amino acid ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 221 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  147 bits (372), Expect = 1e-40
 Identities = 78/204 (38%), Positives = 125/204 (61%), Gaps = 1/204 (0%)

Query: 24  ILNGLKVTLIVTFFAMLLGAVLGVGTTLMKMSSKWYIRFPAELYVGVIRGTPVVVQLVIL 83
           +L G   T+I++   M  G +LG G  LM++S    + + A +YV   RGTP++VQL ++
Sbjct: 15  LLKGAYYTVILSLGGMFFGLLLGFGLALMRLSRFKLVSWLARVYVSFFRGTPLLVQLFLI 74

Query: 84  YF-IVLAALDVDKITAAIIAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLSQAMTMK 142
           Y+ +    +++D I AA+I F LN  AY  EI+RA I ++++GQ EAA S+G+++A T++
Sbjct: 75  YYGLPQVGIELDPIPAAMIGFSLNMAAYACEILRAAIGSIERGQWEAAASIGMTRAQTLR 134

Query: 143 LIILPQAIKNILPALGNEFIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSVPLFTCAL 202
             ILPQA++  LP LGN FI L+K+TA+   I   +L R  +++ +RTFE      + AL
Sbjct: 135 RAILPQAMRTALPPLGNSFISLVKDTALAATIQVPELFRQAQLVSARTFEIFTMYLSAAL 194

Query: 203 IYLFLTYSFTFMLSKFEKRLKQSD 226
           IY  L      + ++ E R+ + D
Sbjct: 195 IYWILASILAHLQNRLEDRVNRHD 218