Pairwise Alignments

Query, 226 a.a., amino acid ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 219 a.a., Glutamate transport membrane-spanning protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  138 bits (348), Expect = 7e-38
 Identities = 73/206 (35%), Positives = 125/206 (60%), Gaps = 3/206 (1%)

Query: 21  ILLILNGLKVTLIVTFFAMLLGAVLGVGTTLMKMSSKWYIRFPAELYVGVIRGTPVVVQL 80
           I L+L G K+TL ++   +  G V+G+     +    W+    A +++ +IRGTP+VVQ+
Sbjct: 12  IPLLLEGAKMTLWISVLGLAGGLVIGLAAGFARTFGGWFANHIALVFIEIIRGTPIVVQV 71

Query: 81  VILYFIVLAA---LDVDKITAAIIAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLSQ 137
           + +YF +  A   L +D  +AA++   +NSGAYI+EI R  + ++ KG  EA  +LGLS+
Sbjct: 72  MFIYFALPMAFNDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSR 131

Query: 138 AMTMKLIILPQAIKNILPALGNEFIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSVPL 197
             T++ +ILP A++ +LP LGN++I+ +K+T++   IG  +L R G+ I +  F      
Sbjct: 132 RETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIW 191

Query: 198 FTCALIYLFLTYSFTFMLSKFEKRLK 223
              A+ YL +T   +F+L + E+R+K
Sbjct: 192 SAVAVFYLIITLVLSFILRRLERRMK 217