Pairwise Alignments

Query, 241 a.a., amino acid ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 254 a.a., ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  268 bits (684), Expect = 1e-76
 Identities = 133/240 (55%), Positives = 180/240 (75%)

Query: 1   MINITNLHKSYGDNAVLKGINEHIRQGEVVSVIGPSGSGKSTFLRCINLLENPTQGDIEI 60
           MI++  L K +G + VL+G++  + +GEVV +IGPSGSGKST LRCIN LE+   G++  
Sbjct: 1   MIHVEGLEKRFGAHRVLQGVSLRVDKGEVVCLIGPSGSGKSTVLRCINGLESYEGGEVRA 60

Query: 61  EGQSITAKDACVDKLRQKVGMVFQNFNLFPHKTVLQNITLAPVSLKLMTQAEADNKALAL 120
            G+ +      + +LR ++GMVFQ FNLFPH+TVL+N+   PV +   + A+A  +ALAL
Sbjct: 61  FGERVDRNAPGIHRLRSRMGMVFQRFNLFPHRTVLENVMEGPVHVLRQSAAQAREEALAL 120

Query: 121 LTQVGLQDKANAYPSSLSGGQKQRVAIARALAMEPDLMLFDEPTSALDPEMVGDVLDVMK 180
           L +VGL +KA A+P+ LSGGQ+QRVAIARALAM+P+ MLFDEPTSALDPE+VGDVL VM+
Sbjct: 121 LAKVGLAEKAQAWPAQLSGGQQQRVAIARALAMKPEAMLFDEPTSALDPELVGDVLGVMR 180

Query: 181 DLAQKGMTMVIVTHEMGFARDVSDRVIFMDGGYVVESNIPEELFTRPKEARTQSFLSKVL 240
            LA +GMTM++VTHEMGFAR+V+DRV F+  G +VE     ++   P++ARTQ FL +VL
Sbjct: 181 ALADEGMTMIVVTHEMGFAREVADRVCFLHSGSIVEEGPSAQVLGSPRQARTQDFLRRVL 240