Pairwise Alignments

Query, 380 a.a., iron-compound ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 339 a.a., putative Iron ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  180 bits (457), Expect = 5e-50
 Identities = 116/303 (38%), Positives = 175/303 (57%), Gaps = 28/303 (9%)

Query: 79  IVMELRLPRILLAFVAGAGLSLAGSVLQTVTRNPLADPYLFGISSGASFGAVVMLTLFSG 138
           IV   RL R L+A   GAGL+  G +LQ + RNPLA+PYL G+S+GAS GAV++  L  G
Sbjct: 58  IVWNYRLTRTLVAAACGAGLATCGVILQAMLRNPLAEPYLLGLSAGASTGAVLVGLLGLG 117

Query: 139 SGFFANAGVIANSGIFSGAEILAGLQWFSLPFGAFIGASLSVLIVLALS-GLGLNSQVER 197
           S                    LA     S+  GAFIGA  +  +VL L+   G +S   +
Sbjct: 118 S--------------------LA----LSMSAGAFIGAGAAFALVLVLARAAGPSSNNAQ 153

Query: 198 MLLSGVATSFMFGALTSLLLY-FASPQATASVLFWSLGSFAKASWSLLILPTIVVLVSFF 256
           ++L+G+A S +F ALT+ L+   A+ +    +LFW LG+ +   W  + L   V +    
Sbjct: 154 VILAGIAGSQLFNALTAFLITKSATAEQARGILFWLLGNLSGVRWPSVWLAVPVAVFGLL 213

Query: 257 IILGWKRQIMALQAGDETAHTLGVNVPKLRLNMLLLCSLITAILVATCGGIGFVGLMIPH 316
           + L  +R + A   G ++A +LG+ V + +L ++   +L+TA++V+  G IGFVGL+IPH
Sbjct: 214 VCLWHRRALDAFTFGADSAASLGIPVRRTQLLLISCAALVTAVMVSIVGAIGFVGLVIPH 273

Query: 317 TVRLLF-PGRQPIL-LTALVGGLFMVWIDVLARCLLGNQELPVGIITASIGSFFFLLILR 374
            +RLL  PG   +L  +AL G LF++  D+L+R L+  Q +PVG++TA IG+  F LIL 
Sbjct: 274 ALRLLLGPGHSRLLPASALGGALFLIVADILSRTLITGQVIPVGVVTALIGAPVFALILV 333

Query: 375 RRK 377
            R+
Sbjct: 334 SRR 336