Pairwise Alignments

Query, 380 a.a., iron-compound ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 334 a.a., iron ABC transporter permease from Serratia liquefaciens MT49

 Score =  172 bits (435), Expect = 2e-47
 Identities = 124/348 (35%), Positives = 192/348 (55%), Gaps = 34/348 (9%)

Query: 33  LLTPIAAASFGAANISFLDVFNVFIDKFSQLFMGENAPSTAAMTDRIVMELRLPRILLAF 92
           LL  +A  + GAAN+  L +   F   + Q F      S  A    I + +RLPR+LLA 
Sbjct: 14  LLVLLALLALGAANMGALTLS--FRTLWQQPF------SDTAW--HIWLNIRLPRVLLAV 63

Query: 93  VAGAGLSLAGSVLQTVTRNPLADPYLFGISSGASFGAVVMLTLFSGSGFFANAGVIANSG 152
           V G  L+++G+V+Q + RNPLADP L GISSG +    +++ +       A   VIA  G
Sbjct: 64  VIGCALAVSGAVMQGLFRNPLADPSLLGISSGGALFVALIIVMP-----LALPPVIALYG 118

Query: 153 IFSGAEILAGLQWFSLPFGAFIGASLSVLIVLALSGLGLNSQVERMLLSGVATSFMFGAL 212
                 +LA          AF+G+ L  L++  +S  G  S + R+LL+G+A + +  A 
Sbjct: 119 -----HMLA----------AFLGSMLVSLLIYGISRSGHGS-LSRLLLAGIAINALCMAA 162

Query: 213 TSLLLYFASPQATASVLFWSLGSFAKASWSLLILPTIVVLVSFFIILGWKRQIMALQAGD 272
             +L Y ++ Q       W +GS +++ W  L++   ++L +  + L   R++  LQ GD
Sbjct: 163 IGVLSYLSNDQQLRQFSLWMMGSLSQSQWPTLVVCASLILPTTLLTLLQARRLNLLQLGD 222

Query: 273 ETAHTLGVNVPKLRLNMLLLCSLITAILVATCGGIGFVGLMIPHTVRLLFPGRQPILL-- 330
           E AH LGVNV + +L +LLL +L+    VA  G IGF+GL++PH VR+   G    LL  
Sbjct: 223 EEAHYLGVNVQRAKLQLLLLSALLIGASVAMSGVIGFIGLVVPHLVRMHLGGDHRWLLPC 282

Query: 331 TALVGGLFMVWIDVLARCLLGNQELPVGIITASIGSFFFL-LILRRRK 377
           +AL G   ++  D LAR L+   E+PVG++T+ IG  +FL L++R+R+
Sbjct: 283 SALGGACLLLVSDTLARTLVAPAEMPVGLMTSLIGGPYFLWLVMRQRE 330