Pairwise Alignments

Query, 380 a.a., iron-compound ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 340 a.a., iron ABC transporter permease from Dickeya dadantii 3937

 Score =  156 bits (394), Expect = 9e-43
 Identities = 110/313 (35%), Positives = 165/313 (52%), Gaps = 36/313 (11%)

Query: 70  PSTAAMTDRIVMELRLPRILLAFVAGAGLSLAGSVLQTVTRNPLADPYLFGISSGASFGA 129
           P    ++  +V   RL R L+A V GAGL++AG+++Q +TRNPLA P LFGI++GA F  
Sbjct: 52  PDPLNVSHILVTSTRLSRTLIAIVVGAGLAVAGALMQVLTRNPLASPGLFGINAGAMFFL 111

Query: 130 VVMLTLFSGSGFFANAGVIANSGIFSGAEILAGLQWFSLPFGAFIGASLSVLIVLALSGL 189
           +V ++LF                       +A   W    + AF GA+++  +V  +  +
Sbjct: 112 IVCVSLFPK---------------------VAMSVWL---WSAFAGAAVAGCLVWLIGTM 147

Query: 190 GLNS-QVERMLLSGVATSFMFGALTSLLLYFASPQATASVLFWSLGSFAKASWSLLILP- 247
           G  S    RM+L+G A + MF A +  +L   + +   +VLFW  GS A    +  +LP 
Sbjct: 148 GKGSLNPLRMVLAGAAITAMFAAFSQAML-VVNQEGLDTVLFWLAGSVADRELA-TVLPL 205

Query: 248 ---TIVVLVSFFIILGWKRQIMALQAGDETAHTLGVNVPKLRLNMLLLCSLITAILVATC 304
               +  LV   ++ G   Q+  L AG+  A  LG    ++RL M LL   +    VA  
Sbjct: 206 MGYCLAALVGALLLSG---QVNVLNAGEAIARGLGQRTGRIRLLMSLLVVALAGGAVAMA 262

Query: 305 GGIGFVGLMIPHTVRLLFPGRQPILL--TALVGGLFMVWIDVLARCLLGNQELPVGIITA 362
           G IGFVGL++PH  R L P     LL   AL+G   ++  D+LAR ++  QE+PVG++TA
Sbjct: 263 GSIGFVGLIVPHMARKLLPADHRWLLPGCALLGACLLLLADILARVVIVPQEVPVGVMTA 322

Query: 363 SIGSFFFLLILRR 375
             G+ FF+ +LRR
Sbjct: 323 LFGAPFFIFLLRR 335