Pairwise Alignments

Query, 380 a.a., iron-compound ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 324 a.a., iron (III ABC transporter permease dicitrate ABC transporter permease from Agrobacterium fabrum C58

 Score =  163 bits (412), Expect = 7e-45
 Identities = 118/356 (33%), Positives = 187/356 (52%), Gaps = 43/356 (12%)

Query: 28  LVGFTLLTPIAAASFGAANISFLDVFNVFIDKFSQLFMGENAPSTAAMTDRIVMELRLPR 87
           L+   LL  IAA  +G  +I++ DV N  +          +AP+   M   IV+E RL R
Sbjct: 8   LIILNLLAVIAAMIWGDQSIAWRDVANALVG---------SAPADLHM---IVIEFRLSR 55

Query: 88  ILLAFVAGAGLSLAGSVLQTVTRNPLADPYLFGISSGASFGAVVMLTLFSGSGFFANAGV 147
            +LA +AG GL++AG++ QTV RNPLA+P + GI++GA+  A V++ LF           
Sbjct: 56  AMLALLAGTGLAVAGTISQTVMRNPLAEPGVLGINAGAALVASVVIILF----------- 104

Query: 148 IANSGIFSGAEILAGLQWFSLPFGAFIGASLSVLIVLALSGLGLNSQVERMLLSGVATSF 207
                        A +    LP+  F GA      V AL+     S + R++L G+  S 
Sbjct: 105 -------------ADVSPTILPWAGFAGAVTMAATVYALAWKRGTSSL-RIILVGIGLSA 150

Query: 208 MFGALTSLLLYFASPQATASVLFWSLGSFAKASWSLLILPTIVVLVSFFIILGW--KRQI 265
           M GA TS L  F +       + W  GS   A W+   + ++++ +S  + L W   RQ+
Sbjct: 151 MAGAGTSFLTAFGNVMDVQRAMIWLSGSVYGADWTK--VKSLLLWLSVPLALTWFSCRQL 208

Query: 266 MALQAGDETAHTLGVNVPKLRLNMLLLCSLITAILVATCGGIGFVGLMIPHTV-RLLFPG 324
             ++ GD+ A  LG  V  +R  ++LLC+LI+   VA  G +GFVGL+ PH   R++ P 
Sbjct: 209 DLIRFGDDVATGLGQKVNLVRAFLILLCTLISGATVAMVGLVGFVGLIAPHVARRIVGPA 268

Query: 325 RQPIL-LTALVGGLFMVWIDVLARCLLGNQELPVGIITASIGSFFFLLILRRRKVA 379
            + ++ + AL G L ++  D++ R ++   +LP GI+TA +G+ FF  +L+ R+ A
Sbjct: 269 HRALIPVAALTGSLLLLVADIIGRTVIAPAQLPAGIVTALLGAPFFAYLLKGRRHA 324