Pairwise Alignments

Query, 380 a.a., iron-compound ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 317 a.a., iron (III ABC transporter permease ABC transporter permease from Agrobacterium fabrum C58

 Score =  172 bits (436), Expect = 1e-47
 Identities = 111/308 (36%), Positives = 174/308 (56%), Gaps = 32/308 (10%)

Query: 75  MTDRIVMELRLPRILLAFVAGAGLSLAGSVLQTVTRNPLADPYLFGISSGASFGAVVMLT 134
           + + IV   RL R ++A   GA L+LAG+VLQ++ RNPLADPY+ GIS+GAS GAV +  
Sbjct: 34  LDEGIVWSYRLSRAVVAACCGASLALAGAVLQSLLRNPLADPYILGISAGASTGAVAVAL 93

Query: 135 LFSGSGFFANAGVIANSGIFSGAEILAGLQWFSLPFGAFIGA--SLSVLIVLALSGLGLN 192
           L  G+GF                         ++P GA IGA  + S++ +LA+     N
Sbjct: 94  LGFGAGF------------------------LTMPAGALIGAFVAFSLVSLLAVRAGHGN 129

Query: 193 SQVERMLLSGVATSFMFGALTSLLL-YFASPQATASVLFWSLGSFAKASWSLLILPTIVV 251
           S +   +L+GVA S +F A+TS ++   A+ +    ++FW LG+ +   W  + L   V 
Sbjct: 130 SAI---ILAGVAGSQLFNAMTSFIVTKSANAEQARGIMFWLLGNLSGVRWPDVWLALPVS 186

Query: 252 LVSFFIILGWKRQIMALQAGDETAHTLGVNVPKLRLNMLLLCSLITAILVATCGGIGFVG 311
           L    + L + R + A   G + A +LG+ V  +   ++ + +++TA +V+  G IGFVG
Sbjct: 187 LAGLAVCLWYARALDAFAFGGQAAASLGIPVRWVYAVLISVSAIMTAAMVSLVGSIGFVG 246

Query: 312 LMIPHTVRLLFPGRQPILL--TALVGGLFMVWIDVLARCLLGNQELPVGIITASIGSFFF 369
           L+IPH  R+    R  ILL  TAL G +FM+  D+L+R ++  Q LP+G+ITA +G+  F
Sbjct: 247 LVIPHAARIFVGVRHGILLPVTALTGAVFMIIADILSRIVIPGQVLPIGVITALVGAPAF 306

Query: 370 LLILRRRK 377
             IL +++
Sbjct: 307 AFILGQKR 314