Pairwise Alignments

Query, 380 a.a., iron-compound ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 355 a.a., iron ABC transporter permease from Agrobacterium fabrum C58

 Score =  179 bits (455), Expect = 8e-50
 Identities = 109/304 (35%), Positives = 168/304 (55%), Gaps = 24/304 (7%)

Query: 79  IVMELRLPRILLAFVAGAGLSLAGSVLQTVTRNPLADPYLFGISSGASFGAVVMLTLFSG 138
           ++ ++R+P  L+A   GA LS+AG+ +QT+  NPLA P+  GIS+ ASFGA + L     
Sbjct: 72  VIWDIRMPIALMAVTVGASLSVAGAQMQTILSNPLASPFTLGISAAASFGAALALV---- 127

Query: 139 SGFFANAGVIANSGIFSGAEILAGLQWFSLPFGAFIGASLSVLIVLALSGLGLNSQVERM 198
                            G  I  G   + +P  AFI A ++ L +   S +     VE +
Sbjct: 128 ----------------GGVAIFPGAVHYMVPINAFIMAMIAALFIHFASTMR-GVTVETI 170

Query: 199 LLSGVATSFMFGALTSLLLYFASPQATASVLFWSLGSFAKASWSLLILPTIVVLVSFFII 258
           +L G+A  F F A  SLL Y AS QA A+V+FW++GS  KA+W  + +   +++V+  + 
Sbjct: 171 VLLGIALVFTFNAALSLLEYLASEQALAAVVFWTMGSLTKATWDKVYITAAILVVTVPLF 230

Query: 259 LGWKRQIMALQAGDETAHTLGVNVPKLRLNMLLLCSLITAILVATCGGIGFVGLMIPHTV 318
           +     + AL+ GD+ A ++G+NV +LRL  +L  SL+ AI V+  G IGFVGL+ PH  
Sbjct: 231 MRQAWALTALRLGDDKAASMGINVRRLRLTTMLTVSLLAAIPVSFVGTIGFVGLVGPHIA 290

Query: 319 RLLFPGRQPILL--TALVGGLFMVWIDVLARCLLGNQELPVGIITASIG-SFFFLLILRR 375
           R++    Q   L  + + G L +    V+++ L+    LP+G+ITA +G  FFF LI   
Sbjct: 291 RMVVGEDQRFFLPGSIICGALLLSATSVISKILIPGAILPIGVITALVGVPFFFALIFGN 350

Query: 376 RKVA 379
           R+ A
Sbjct: 351 RRRA 354