Pairwise Alignments

Query, 380 a.a., iron-compound ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 362 a.a., ABC transporter, membrane spanning protein (hemin) from Agrobacterium fabrum C58

 Score =  160 bits (405), Expect = 5e-44
 Identities = 101/303 (33%), Positives = 164/303 (54%), Gaps = 19/303 (6%)

Query: 77  DRIVME-LRLPRILLAFVAGAGLSLAGSVLQTVTRNPLADPYLFGISSGASFGAVVMLTL 135
           DR+++E +RLPR  L  + GAGL ++G+++Q + RNPLADP + G++SGA+  AV  ++L
Sbjct: 67  DRVILEAVRLPRTALGMLIGAGLGVSGAMMQGLFRNPLADPGIVGVTSGAALFAVAAISL 126

Query: 136 FSGSGFFANAGVIANSGIFSGAEILAGLQWFSLPFGAFIGASLSVLIVLALSGLGLNSQV 195
             GS        +A   +F G   L        P  AF G  L+  ++  ++     +  
Sbjct: 127 GEGS--------LAAVAVFFGPHFL--------PLMAFFGGLLNTWVLYVIATKDGATST 170

Query: 196 ERMLLSGVATSFMFGALTSLLLYFASPQATASVLFWSLGSFAKASWSLLILPTIVVLVSF 255
             ++L+G+A + + GALT L+++ A  +A   + FWSLGS   A+ + ++     ++V  
Sbjct: 171 TTLILAGIAVAAISGALTGLMIFVADDRALRDITFWSLGSLGGATPAKVLATLPFIIVVL 230

Query: 256 FIILGWKRQIMALQAGDETAHTLGVNVPKLRLNMLLLCSLITAILVATCGGIGFVGLMIP 315
            II    R + AL  GD  A  +G+ V +L+  ++L  +      VA  G IGFVG+++P
Sbjct: 231 AIIPFVARGLDALILGDAAAFHMGIPVQRLKRVVILAVAAACGASVAAAGSIGFVGIVVP 290

Query: 316 HTVRLLFPGRQPILL--TALVGGLFMVWIDVLARCLLGNQELPVGIITASIGSFFFLLIL 373
           H +RL        LL  +AL G   ++  D  AR +    ELP+G++TA IG+  FL +L
Sbjct: 291 HLLRLAIGPSHRFLLPASALGGAALLLLADSFARTVASPAELPIGVVTALIGAPVFLFLL 350

Query: 374 RRR 376
             R
Sbjct: 351 LGR 353