Pairwise Alignments

Query, 1244 a.a., 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 1235 a.a., cobalamin-dependent methionine synthase from Pseudomonas putida KT2440

 Score = 1533 bits (3968), Expect = 0.0
 Identities = 780/1243 (62%), Positives = 961/1243 (77%), Gaps = 22/1243 (1%)

Query: 9    SHTLADIRNQLSTRILILDGAMGTMIQGYKLEEADYRGERFKDWHTDVKGNNDLLVLTQP 68
            S  L  ++N L  RILILDG MGTMIQ Y+LEE DYRG RF DW +DVKGNNDLL+L++P
Sbjct: 5    SARLQALQNALKERILILDGGMGTMIQSYRLEEHDYRGTRFADWPSDVKGNNDLLLLSRP 64

Query: 69   HIIKQIHTDYLLAGADIIETNTFNATTIAMADYDMQSLSAEINREGARLAREACDAIEQA 128
             +I  I   YL AGADI+ETNTFNAT I+ ADY M+SL  E+N EGAR+AR+  DA    
Sbjct: 65   DVIAAIEKAYLDAGADILETNTFNATQISQADYGMESLVYELNVEGARIARQVADAKTLE 124

Query: 129  T-GKPRYVAGVLGPTNRTCSISPDVNDPGFRNIHFDELVTAYCESTRALIEGGADIIMVE 187
            T  KPR+VAGVLGPT+RTCSISPDVNDPGFRN+ FDELV  Y E+TR LIEGGAD+I++E
Sbjct: 125  TPDKPRFVAGVLGPTSRTCSISPDVNDPGFRNVTFDELVENYIEATRGLIEGGADLILIE 184

Query: 188  TIFDTLNAKAALFAIETVFDELFGANSPARLPVMISGTITDASGRTLTGQTTEAFYNSLR 247
            TIFDTLNAKAA+FA++ VF++         LP+MISGTITDASGRTL+GQTTEAF+NS+R
Sbjct: 185  TIFDTLNAKAAIFAVQQVFED-----DNVELPIMISGTITDASGRTLSGQTTEAFWNSVR 239

Query: 248  HIKPLSIGLNCALGPKELRPYVEELSRIAECYVSAHPNAGLPNEFGGYDETPEDMAKVIQ 307
            H KP+S+GLNCALG K+LRPY+EEL+  A+ +VSAHPNAGLPN FG YDETP +MA V++
Sbjct: 240  HAKPISVGLNCALGAKDLRPYLEELATKADTHVSAHPNAGLPNAFGEYDETPAEMAAVVE 299

Query: 308  EWAREGMLNIIGGCCGSTPEHIKVIREAVEQFAPRVLPEIPVACRLAGLEPLTIDAQTLF 367
            E+A  G LNIIGGCCG+TP HI+ I EAV ++ PR +PEI  ACRL+GLEP TID Q+LF
Sbjct: 300  EFAASGFLNIIGGCCGTTPGHIQAIAEAVAKYKPREIPEIAKACRLSGLEPFTIDRQSLF 359

Query: 368  VNVGERTNVTGSAKFLKLIKEGKFEQALDVAREQVESGAQIIDINMDEGMLDGVEIMHKF 427
            VNVGERTN+TGSAKF +LI+E  + +AL+VA +QVE+GAQ+IDINMDEGMLD    M +F
Sbjct: 360  VNVGERTNITGSAKFARLIREENYTEALEVALQQVEAGAQVIDINMDEGMLDSQAAMVRF 419

Query: 428  LNLIASEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISLKEGEEKFIEQATLVKRY 487
            LNLIA EPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSIS+KEG E+F   A L KRY
Sbjct: 420  LNLIAGEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFKHHARLCKRY 479

Query: 488  GAAAIIMAFDEQGQADTKARKVEICTRAYRVLVDKVGFPPEDIIFDPNIFAIATGIDEHD 547
            GAA ++MAFDE GQADT ARK EIC R+Y +LV++VGFPPEDIIFDPNIFA+ATGI+EH+
Sbjct: 480  GAAVVVMAFDEVGQADTAARKKEICQRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHN 539

Query: 548  NYAVDFIDAIKEIKATLPHAMISGGVSNVSFSFRGNNPVREAIHAVFLYHAIKVGMDMGI 607
            NYAVDFI+A   I+  LPHA+ SGGVSNVSFSFRGNNPVREAIH+VFLYHAI+ G+ MGI
Sbjct: 540  NYAVDFIEACAYIRDHLPHALSSGGVSNVSFSFRGNNPVREAIHSVFLYHAIQNGLTMGI 599

Query: 608  VNAGQLAIFDDIDPELKVRVENVVLNLPCPVEGSNNTEQLLEIAEKFRGDGSSSAKKEDL 667
            VNAGQL I+D+I  +L+ +VE+VVLN        + T+ LL IA+ ++G G ++ + E+ 
Sbjct: 600  VNAGQLEIYDEIPAQLREKVEDVVLN-----RTPHGTDALLAIADDYKG-GGATKEVENE 653

Query: 668  EWRSWPVNQRLAHALVKGITEFIDEDTEAARQAASRPLDVIEGPLMDGMNIVGDLFGSGK 727
            EWRS PV +RL HALVKGIT FI EDTEA RQ  +RP++VIEGPLM+GMN+VGDLFG+GK
Sbjct: 654  EWRSLPVEKRLEHALVKGITAFIVEDTEACRQQCARPIEVIEGPLMNGMNVVGDLFGAGK 713

Query: 728  MFLPQVVKSARVMKKAVAYLNPFIEKEK-VAGQSNGKILMVTVKSDVHDIGKNIVGVVLA 786
            MFLPQVVKSARVMK+AVA+L PFIE EK    ++ GKILM TVK DVHDIGKNIVGVVL 
Sbjct: 714  MFLPQVVKSARVMKQAVAHLIPFIEAEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLG 773

Query: 787  CNGFEVFDLGVMVSVERILEAVKEHNIDIIGMSGLITPSLDEMVHNVKTFHREGLTIPAI 846
            CNG+++ DLGVMV  E+IL+  +E   DIIG+SGLITPSLDEMVH  +   R+G  +P +
Sbjct: 774  CNGYDIVDLGVMVPAEKILQTAREQKCDIIGLSGLITPSLDEMVHVAREMQRQGFELPLM 833

Query: 847  IGGATCSKIHTAVKIAPHYPHGA-IYIADASRAVPMVSKLVNNETRQATIDETYAEYDDM 905
            IGGAT SK HTAVKI P Y + A IY+ DASRAV + ++L++ E +   +++T  EY D+
Sbjct: 834  IGGATTSKAHTAVKIEPKYSNDAVIYVTDASRAVGVATQLLSKELKPGFVEKTRLEYVDV 893

Query: 906  RTKRLSQAKRKEIVSLEAARENRCQHDWANYSPFKPNVLGRQVFDDYPLTDLVDRIDWTP 965
            R +  +++ R E +S   A   + Q+DWA Y P  P+  G +V +D  L  L + IDWTP
Sbjct: 894  RERTANRSARTERLSYAQAIAAKPQYDWAGYQPTAPSFTGVKVLEDIDLRTLAEYIDWTP 953

Query: 966  FFRAWELHGHYPEILSDKVVGVEAQKLFSDGKAMLKKIIEEKWLTAKGVIGLFPANTVGF 1025
            FF +W+L G +P IL+D+VVG  A  L+ D + ML K+I+EK ++A+ V G +PAN V  
Sbjct: 954  FFISWDLAGKFPRILTDEVVGEAATALYKDAREMLDKLIDEKLISARAVFGFWPANQVDD 1013

Query: 1026 DDIELYTDETRTEVELTTHHLRMQ-LERVGNDNFCLADFVAPKDSGVADYMGGFAVTAGH 1084
            DDIE+Y ++   +   T HHLR Q ++  G  N+ LADFVAPKDSGV DY+GGF  TAG 
Sbjct: 1014 DDIEVYGED--GQALATLHHLRQQTIKPDGKPNWSLADFVAPKDSGVTDYVGGFITTAGI 1071

Query: 1085 GIDEHVARFEANHDDYNAIMLKCLADRLAEAFAERMHERVRKEFWGYAADEQLDNEALIR 1144
            G +E    ++   DDY++IM+K LADRLAEA AE +HE+VRKE WGYA DE LDNEALI+
Sbjct: 1072 GAEEVAKAYQDKGDDYSSIMVKALADRLAEACAEWLHEQVRKEHWGYARDEHLDNEALIK 1131

Query: 1145 EKYKGIRPAPGYPACPDHTEKGLLWELLKP---NET--IDLNITESYAMFPTAAVSGWYF 1199
            E+Y GIRPAPGYPACPDHTEK  L+ LL      ET    + +TE +AMFP AAVSGWYF
Sbjct: 1132 EQYSGIRPAPGYPACPDHTEKETLFRLLDGTAIGETGPSGVYLTEHFAMFPAAAVSGWYF 1191

Query: 1200 AHPKSRYFGVSNIGRDQVEDYAKRKGMTVAETEKWLAPVLDYD 1242
            AHP+++YF V  + +DQ+E Y+ RKG  ++ +E+WLAP L YD
Sbjct: 1192 AHPQAKYFAVGKVDKDQIERYSARKGQDISVSERWLAPNLGYD 1234