Pairwise Alignments

Query, 224 a.a., NADH dehydrogenase I, B subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 220 a.a., NADH dehydrogenase subunit B (NCBI) from Escherichia coli BW25113

 Score =  368 bits (945), Expect = e-107
 Identities = 173/224 (77%), Positives = 197/224 (87%), Gaps = 4/224 (1%)

Query: 1   MKYTLTRIDPDAPVERYPQEQRQTVDDPLAQEATRGIMMGRLEEVLKDTVNWGRKNSLWP 60
           M YTLTRIDP+   +RYP ++++ V DPL QE  + + MG+L     D VNWGRKNS+WP
Sbjct: 1   MDYTLTRIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLN----DMVNWGRKNSIWP 56

Query: 61  YNFGISCCYVEMCTAFTSPHDVARFGAEVIRASPRQADFMVIAGTPFIKMAPVIQRLYEQ 120
           YNFG+SCCYVEM T+FT+ HDVARFGAEV+RASPRQAD MV+AGT F KMAPVIQRLY+Q
Sbjct: 57  YNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQ 116

Query: 121 LLEPKWVISMGACANSGGMYDIYSVVQGVDKFLPVDVYIPGCPPRPEAFLQALMLLQDSI 180
           +LEPKWVISMGACANSGGMYDIYSVVQGVDKF+PVDVYIPGCPPRPEA++QALMLLQ+SI
Sbjct: 117 MLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESI 176

Query: 181 GKERRPLSWVVGDQGIYRPQMPAEKERKRGERINVTNLRTPDEI 224
           GKERRPLSWVVGDQG+YR  M +E+ERKRGERI VTNLRTPDEI
Sbjct: 177 GKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPDEI 220