Pairwise Alignments

Query, 322 a.a., NADH dehydrogenase I, H subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 358 a.a., NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  265 bits (677), Expect = 1e-75
 Identities = 137/320 (42%), Positives = 202/320 (63%), Gaps = 16/320 (5%)

Query: 14  KALIVLVGIVGAGAFMSFIERRLLALWQDRHGPNRVGPFGLFQLLADMIKMFFKEDWIPP 73
           K ++VL  ++GA A+++  ER+LL   Q RHGPNRVGPFGL Q +AD +K+  KE   P 
Sbjct: 31  KIVVVLAPLMGAVAYLTLWERKLLGWIQVRHGPNRVGPFGLLQPIADALKLLTKELIRPS 90

Query: 74  FADRRIFILAPIIAFTAFILAFAVVPITPTWGVADLNVGLLYILAIAGLAVYAVLFAGWS 133
            A   +F L P++A    + A+  +P  P   +A++N GLL ILAI  + VY V+ AGW+
Sbjct: 91  AASNGLFRLGPVMAIMPALAAWVAIPFGPEAIIANVNAGLLVILAITSIEVYGVIIAGWA 150

Query: 134 SNNKYSLLGSLRASAQTLSYEVFLGLSLMGIVIQTGSFNLRDIVEAQA-------GL--- 183
           SN+KY+ LG+LRASAQ +SYE+ +G   + +V+  GS +L +IV +QA       GL   
Sbjct: 151 SNSKYAFLGALRASAQMVSYEIAIGFCFLVVVMTAGSLHLGEIVASQARGMGANMGLGFL 210

Query: 184 -WNVVPQFLGFITFLFAGVAVTHRHPFDQPEAEQELADGYHIEYAGMKWGLFFVGEYIGI 242
            WN +P    F  +L +GVA T+RHPFD  E E E+  G+ +EY+GM + +FF+ EY  +
Sbjct: 211 SWNWLPLLPIFFVYLISGVAETNRHPFDVVEGEAEIVAGHMVEYSGMGFAIFFLAEYASM 270

Query: 243 VLISSLIVTLFFGGWHGP-----WLPPFFWFALKTACFMVFFILLRASLPRPRFDQVMSF 297
            L+S L V +F GGW  P     ++P + W  +KT   +  FI +RA+ PR R+DQ+M  
Sbjct: 271 WLVSVLAVLMFLGGWLSPIAALDFIPGWIWLGIKTCVVVSMFIWIRATFPRFRYDQIMRL 330

Query: 298 GWKVCLPLTLINMLITAAVV 317
           GWK+ +P+TLI +L+  A++
Sbjct: 331 GWKIFIPVTLIWLLLVGALM 350