Pairwise Alignments

Query, 322 a.a., NADH dehydrogenase I, H subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 341 a.a., NADH-quinone oxidoreductase subunit H from Magnetospirillum magneticum AMB-1

 Score =  291 bits (745), Expect = 2e-83
 Identities = 147/331 (44%), Positives = 220/331 (66%), Gaps = 14/331 (4%)

Query: 1   MSDSLTELLLE-IGKALIVLVGIVG-------AGAFMSFIERRLLALWQDRHGPNRVGPF 52
           M D LT LL   + + LI+++ IV        A A++++ ER+++   Q R GPN VGPF
Sbjct: 1   MVDLLTGLLPPFVWRLLIIVLQIVAIVLPLLIAVAYLTYAERKVIGAMQLRKGPNVVGPF 60

Query: 53  GLFQLLADMIKMFFKEDWIPPFADRRIFILAPIIAFTAFILAFAVVPITPTWGVADLNVG 112
           GL Q +AD +K+F KE  +P  A+R +F+ AP++ F   ++A+AV+P    W +AD+NVG
Sbjct: 61  GLLQPMADGLKLFVKETVLPTSANRVVFVGAPMLTFFLALVAWAVIPFDKGWVLADINVG 120

Query: 113 LLYILAIAGLAVYAVLFAGWSSNNKYSLLGSLRASAQTLSYEVFLGLSLMGIVIQTGSFN 172
           +LY+ AI+ L VY ++ AGW+SN+KY+ LG LR++AQ +SYEV +G  L+ +++  GS N
Sbjct: 121 VLYLFAISSLGVYGIIMAGWASNSKYAFLGGLRSAAQMVSYEVSIGFILISVLLTVGSLN 180

Query: 173 LRDIVEAQAGLWNVVPQFLGFITFLFAGVAVTHRHPFDQPEAEQELADGYHIEYAGMKWG 232
           L D+V AQ+ +W +VP F  FI F+ +G+A T+R PFD PEAE EL  GY++EY+ M + 
Sbjct: 181 LSDVVTAQSKMWFIVPHFPLFILFIISGLAETNRAPFDLPEAEAELVAGYNVEYSAMTFA 240

Query: 233 LFFVGEYIGIVLISSLIVTLFFGGWHGP----WL--PPFFWFALKTACFMVFFILLRASL 286
           LFF+GEY  ++++ ++   LF GGW  P    WL  P   WF LK    M  F+ +RA+ 
Sbjct: 241 LFFLGEYANMLMMGAMTSILFLGGWMAPFGLGWLPIPGLIWFVLKICLVMFVFLWVRATF 300

Query: 287 PRPRFDQVMSFGWKVCLPLTLINMLITAAVV 317
           PR R+DQ+M  GWKV LP +L  +++TA+V+
Sbjct: 301 PRYRYDQLMRLGWKVFLPFSLFWLVLTASVL 331