Pairwise Alignments

Query, 322 a.a., NADH dehydrogenase I, H subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 346 a.a., NADH dehydrogenase subunit H (EC 1.6.5.3) from Kangiella aquimarina DSM 16071

 Score =  276 bits (707), Expect = 4e-79
 Identities = 142/336 (42%), Positives = 212/336 (63%), Gaps = 15/336 (4%)

Query: 1   MSDSLTELLLEIGKALIVLVGIVGAGAFMSFIERRLLALWQDRHGPNRVGPFGLFQLLAD 60
           M D + + L+   K  ++L+ ++ A A+ +F ER+L+   Q R GPNRVGP G  Q +AD
Sbjct: 1   MIDMIVDGLIIGFKISLILLPLILAVAYTTFAERKLIGYMQLRLGPNRVGPKGWLQPIAD 60

Query: 61  MIKMFFKEDWIPPFADRRIFILAPIIAFTAFILAFAVVPITPTWGVADLNVGLLYILAIA 120
           +IK+  KE  IP  A++ +F++AP++       A+AV+P      +AD+NVGLLYILA+ 
Sbjct: 61  VIKLLMKEIVIPSGANKALFLIAPVLFIAPSFAAWAVIPFNAELVLADINVGLLYILAMT 120

Query: 121 GLAVYAVLFAGWSSNNKYSLLGSLRASAQTLSYEVFLGLSLMGIVIQTGSFNLRDIVEAQ 180
            +AVY V+ AGW+SN+KY+LLGSLR+++Q +SYE+ +G +L+ +++ +GS NL +IV+AQ
Sbjct: 121 SIAVYGVIIAGWASNSKYALLGSLRSASQIVSYEIAMGFALVAVLMASGSMNLGEIVKAQ 180

Query: 181 AG---LWNVVPQFLGFITFLFAGVAVTHRHPFDQPEAEQELADGYHIEYAGMKWGLFFVG 237
            G    W  +P       +  +GVA T+R PFD PE E E+  G+H+EYAG+ + LFF+ 
Sbjct: 181 EGPFWHWYWIPLLPILAVYWISGVAETNRAPFDLPEGESEIVAGFHVEYAGIGFALFFLA 240

Query: 238 EYIGIVLISSLIVTLFFGGWHGP------------WLPPFFWFALKTACFMVFFILLRAS 285
           EY  ++LIS L    FFGGW  P            W+P   W  LK A F+   I LRA+
Sbjct: 241 EYANMILISVLTALFFFGGWLNPFMGIPYLEAATDWIPGTVWLLLKAAWFLFMMIWLRAT 300

Query: 286 LPRPRFDQVMSFGWKVCLPLTLINMLITAAVVLMNV 321
            PR R+DQVM  GWKV +P+T++ ++I   ++   V
Sbjct: 301 FPRYRYDQVMRLGWKVFIPVTVVWLIILTFMIKAGV 336