Pairwise Alignments

Query, 322 a.a., NADH dehydrogenase I, H subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 348 a.a., NADH ubiquinone oxidoreductase I chain H from Agrobacterium fabrum C58

 Score =  270 bits (689), Expect = 5e-77
 Identities = 147/330 (44%), Positives = 208/330 (63%), Gaps = 22/330 (6%)

Query: 9   LLEIGKALIVLVGIVGAGAFMSFIERRLLALWQDRHGPNRVGPFGLFQLLADMIKMFFKE 68
           L+ +G++L++LV ++ A AF+   +R++ A  Q R GPN VGPFGLFQ  AD++K   KE
Sbjct: 13  LIMVGQSLLLLVCLLVAIAFLLLADRKVWAAVQLRRGPNVVGPFGLFQSFADLLKFILKE 72

Query: 69  DWIPPFADRRIFILAPIIAFTAFILAFAVVPITPTWGVADLNVGLLYILAIAGLAVYAVL 128
             IP  A++ +F+LAP++A T  +  +AV+P    W VA++NVG+LYI AI+ L VY ++
Sbjct: 73  PVIPAGANKAVFLLAPLVAVTLALATYAVIPFADGWVVANINVGILYIFAISSLEVYGII 132

Query: 129 FAGWSSNNKYSLLGSLRASAQTLSYEVFLGLSLMGIVIQTGSFNLRDIVEAQ-AGL---- 183
             GW+SN+KY  LG+LR++AQ +SYEV +GL ++ +++  GS NL DIV AQ  GL    
Sbjct: 133 MGGWASNSKYPFLGALRSAAQMVSYEVSIGLVIVTVLLCVGSLNLTDIVLAQRTGLGTMM 192

Query: 184 --------WNVVPQFLGFITFLFAGVAVTHRHPFDQPEAEQELADGYHIEYAGMKWGLFF 235
                   W+ +  F  FI F  +G+A T+R PFD PEAE EL  G+ +EY    + +F 
Sbjct: 193 GLPASFLDWHWLSLFPMFIVFFISGLAETNRPPFDLPEAESELVAGHMVEYGSTPYMMFM 252

Query: 236 VGEYIGIVLISSLIVTLFFGG-------WHGPWLPPFFWFALKTACFMVFFI-LLRASLP 287
           +GEY  IVLI  L   LF GG       W   W+P   WFALK  C + F I L +A +P
Sbjct: 253 LGEYAAIVLICCLTTILFLGGWLPIVDVWFLNWVPGIVWFALK-GCMVFFMIALTKAFVP 311

Query: 288 RPRFDQVMSFGWKVCLPLTLINMLITAAVV 317
           R R+DQ+M  GWKV LPL+L  ++I A V+
Sbjct: 312 RYRYDQLMRLGWKVFLPLSLAMVVIVAFVL 341