Pairwise Alignments

Query, 310 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 307 a.a., LysR family transcriptional regulator from Paraburkholderia sabiae LMG 24235

 Score = 77.0 bits (188), Expect = 5e-19
 Identities = 75/292 (25%), Positives = 129/292 (44%), Gaps = 34/292 (11%)

Query: 19  FTHTANKLFMTQPGVSQHIKKLEEQVGVHLLLRKGKRFELTEAGAILYQHARQYQLAETE 78
           F+  A +L +TQPGVS  +K+LE  +G+ L  + G+R  LT AG  LY H R  Q    +
Sbjct: 21  FSRAAEELHLTQPGVSSQLKQLETSIGMPLFEQVGRRVFLTAAGKELYSHTRLLQ----Q 76

Query: 79  LLARLQTDNTYVGECRFG------CSGAIASLLYPHFLERQIQYPELCVKIEAAPNQRIV 132
            L+ L+T    + + + G       SG    L      +    +P + V +     + ++
Sbjct: 77  QLSVLETSLDQLRDMKQGKLKVSVVSGTANPLALQLIAKFTRAFPGVRVSLSVGNRECVL 136

Query: 133 SGILTNQLDMGIVTKRGEEADLTYQALGYAELSLVLPSQYLV---DKIGIELLEQIGFID 189
           + + +N+ D+ I+    E   L    +    L ++ P  + +    +I +E LE+  F+ 
Sbjct: 137 NELASNETDLAIMGLPPEGQGLAAVRVARNPLVIIAPPDHALVRERRIALEALERETFL- 195

Query: 190 HPDGDYYLQQVLQANFGGRAPMVNSRTGSPVKAHTMAFTHHIRRTGYVNQLSQILLPVAK 249
                     V ++  G R  M           H ++F    R    V+    I   V  
Sbjct: 196 ----------VRESGSGTRRAMERF-----FAEHRVSF----RPGMEVSNNEAIKWAVQA 236

Query: 250 GLGFTVLPLSTVNAFMPRESLWAVDLEQ-KVQESLYLVHKSTRPLPSRFDAF 300
           G+G +V+PL+TV A +    L  +D+E   +   LYLVH+ ++ L +   AF
Sbjct: 237 GMGLSVVPLATVMAELETLRLKVLDVEHFPIVRYLYLVHRESKQLSTAASAF 288