Pairwise Alignments

Query, 310 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 297 a.a., LysR family transcriptional regulator from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 68.6 bits (166), Expect = 2e-16
 Identities = 72/276 (26%), Positives = 116/276 (42%), Gaps = 41/276 (14%)

Query: 5   QWLATFVTLVEVGHFTHTANKLFMTQPGVSQHIKKLEEQVGVHLLLRKGKRFELTEAGAI 64
           Q +  F+ L +  HF +TA ++F+TQ  +S+ IK LEE++GV L  R  +  +LTEAGA 
Sbjct: 4   QQIKYFLALAQELHFWNTAERMFITQSALSRQIKALEEELGVRLFERNKRSVKLTEAGAF 63

Query: 65  LYQHARQY--QLAETELLARLQTDNTYVGECRFGCSGAIASLLYPHFLERQIQ-YPELCV 121
           L +       ++    L AR   +  + G  R G  G+IA    P  +    Q  PEL V
Sbjct: 64  LREQWLPLLDEINRVHLQARKIHEGAF-GTVRIGYPGSIAYSFMPDLITSISQTLPELKV 122

Query: 122 KIEAAPNQRIVSGILTNQLDMGIVTKRGEEADLTYQALGYAELSLVLPSQYLVDKIGIEL 181
           ++    +      +L  Q+D+       E   L    L     +LV+P            
Sbjct: 123 ELVEPTDISFEQLLLNYQMDLAFRRDPAENPALQSTCLYSEPFTLVVPK----------- 171

Query: 182 LEQIGFIDHPDGDYYLQQVLQANFGGRAPMVNSRTGSPVKAHTMAFTHHIRRT----GYV 237
                       D++L +    NF G   + N +      A    +T  +R+     G+ 
Sbjct: 172 ------------DHWLNE---ENFAGLHDLRNEKFILSNLAQNTFYTSSLRQIFDDQGFA 216

Query: 238 NQL-------SQILLPVAKGLGFTVLPLSTVNAFMP 266
             +       + +L  V+KGLG T+LP S   + +P
Sbjct: 217 PDVRVETDFGAMVLGLVSKGLGVTILPHSYSFSALP 252