Pairwise Alignments

Query, 310 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 293 a.a., LysR family transcriptional regulator from Dickeya dadantii 3937

 Score = 79.3 bits (194), Expect = 1e-19
 Identities = 74/295 (25%), Positives = 119/295 (40%), Gaps = 24/295 (8%)

Query: 2   LNQQWLATFVTLVEVGHFTHTANKLFMTQPGVSQHIKKLEEQVGVHLLLRKGKRFELTEA 61
           LN + L TF T++  G F+  AN+L ++QP VSQ  ++LE   GV L  R GK    T A
Sbjct: 4   LNLELLETFTTVMREGSFSAAANRLNLSQPAVSQQFRQLEHYFGVRLAERSGKNLRPTPA 63

Query: 62  GAILYQHARQY-QLAETELLARLQTDNTYVGECRFGCSGAIASLLYPHFLERQIQ-YPEL 119
           G  L   A Q  QL      A  +     +G    G        L P  L +  Q YP L
Sbjct: 64  GDTLLIKAEQIRQLVGETRQAIAEYTEEVMGHVILGTGATACIHLMPPLLRQLRQDYPRL 123

Query: 120 CVKIEAAPNQRIVSGILTNQLDMGIVTKRGEEADLTYQALGYAELSLVLPSQYLVDKIGI 179
            V +     + I+  ++ N++D+G+VT     A++    +   EL  +       + I  
Sbjct: 124 TVGVRTGNTRDIIQAVIDNRIDVGLVTLPIPSANVAVTPVMEDELVAISNDPTFPESISP 183

Query: 180 ELLEQIGFIDHPDGDYYLQQVLQ-ANFGGRAPMVNSRTGSPVKAHTMAFTHHIRRTGYVN 238
             L     I    G      + +  N  G  P                    +   G + 
Sbjct: 184 AFLHTRPLILFERGSSTRTLIDRWFNDAGTQP------------------QPVMELGSIE 225

Query: 239 QLSQILLPVAKGLGFTVLPLSTVNAFMPRESLWAVDLEQKVQESLYLVHKSTRPL 293
            L +++L    GLG++++P  +V++ MP        L   +  +L +V +  +PL
Sbjct: 226 ALKEMVL---AGLGYSIVPKMSVDSDMPASMFHIRPLNPTLSRTLAIVMRQDKPL 277