Pairwise Alignments

Query, 245 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 255 a.a., hypothetical protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 58.5 bits (140), Expect = 1e-13
 Identities = 61/242 (25%), Positives = 101/242 (41%), Gaps = 18/242 (7%)

Query: 5   LTAALLMTAPFMANAGADFVKGDKTFAGEAELGATLTTGNTDTSSYKGRLNFKHELGDWE 64
           LTA   +  P ++ A    +K D  +      GA +++GN D  +         E  D +
Sbjct: 10  LTAVSALLLPTLSQAQVT-LKPDGQWRYLLTAGANISSGNNDAGTLNLAAEGARETDDDK 68

Query: 65  NQYLLEGLYKEDTGAVTAKRYLAGAQGNYKMNDRSYWFANANYEV--DPFTGYDYTLSGA 122
             +  +      +G  T +RY  GA+  Y  +    WF   + E+  D         S A
Sbjct: 69  WTWAAKADRARSSGVDTTERY--GARTQYNRDFSVDWFGFGSGELLRDRLANIAGRTSVA 126

Query: 123 TGYGHRLLDTSKTFLDVEIGPGYIYQR----LDSEQALLEGTDSNDSVVAHGVINFETEI 178
           +G G  +    + F DV +G GY Y R     D   A+ +     + V+A        ++
Sbjct: 127 SGVGRHVWQEERGFFDVSVGLGYTYDRYIRSTDIAGAMRDRYGRLELVLAE---ESSHKL 183

Query: 179 TETSKFQQRF-----VADYGEKLDARSETSLTANIIGALAMKFAIIVRYNSEPLDDKKST 233
           TET+  +Q+F     + D G K  A  +T LT  +  A+ +   +  RY+S+P  + K  
Sbjct: 184 TETTSLRQKFTLYPDLRDSG-KYRAVFDTGLTVAMTEAINLSAGLSYRYDSDPGTNLKKA 242

Query: 234 DT 235
           DT
Sbjct: 243 DT 244