Pairwise Alignments

Query, 245 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 241 a.a., Putative outer membrane protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 63.5 bits (153), Expect = 4e-15
 Identities = 56/222 (25%), Positives = 89/222 (40%), Gaps = 18/222 (8%)

Query: 28  KTFAGEAELGATLTTGNTDTSSYKGRLNFKHELGDWENQYLLEGLYKEDTGAVT-----A 82
           K F G    G    +GNT +SS             W  Q     L+   +   +     +
Sbjct: 30  KPFEGNLNAGYLAQSGNTKSSSLTADTAMT-----WYGQRTAWSLWGNASNTSSNDERSS 84

Query: 83  KRYLAGAQGNYKMNDRSYWFANANYEVDPFTGYDYTLSGATGYGHRLLDTSKTFLDVEIG 142
           ++Y  GA+  + M D  Y F  A++  D F GY        GYG + L+        E G
Sbjct: 85  EKYAVGARNRFNMTDYDYTFGQASWLTDRFNGYRQRDVLTAGYGRQFLNGPVHSFRFEFG 144

Query: 143 PGYIYQRLDSEQALLEGTDSNDSVVAHGVINFETEITETSKFQQRFVADYGEKLDARSET 202
           PG  Y     ++   + T++     A G  ++  ++T+ +KF Q       E     SET
Sbjct: 145 PGVRY-----DEHTDDTTETQPLGYASG--SYAWQLTDNAKFTQGVSVFGAEDTTLNSET 197

Query: 203 SLTANIIGALAMKFAIIVRYNSEPLDD-KKSTDTETNMTLLY 243
           +L   I     +K    + +NS+P +   + TD  T +TL Y
Sbjct: 198 ALNVAINEHFGLKVGYNLTWNSQPPESAPEHTDRRTTVTLGY 239