Pairwise Alignments

Query, 398 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 388 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 48.9 bits (115), Expect = 2e-10
 Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 35/258 (13%)

Query: 58  IKASIQAAIMDSQQPFSGSVILLER-GKPLLEL-------QKGEGISKDSRFVMASLSKQ 109
           I+A +++ I D      G+VI + R G+  L+        + G  + +D+ F + SL+K 
Sbjct: 19  IRADVESGIYD------GAVIKVARHGQIALDATIGFSNRRAGAAMREDAVFKVLSLTKA 72

Query: 110 ITATLILQAVDAGKLDLT----QTLNHYLVGDAKGDNKALKAVVAGTNSSANALNPG--- 162
            T TL+L+A+D G L LT      +  +   D     +  +  V    +    L+P    
Sbjct: 73  FTTTLVLEAIDLGLLSLTTRVVDVIPEFWGRDLFRSGRKERVNVGHLLTHRAGLSPTPQP 132

Query: 163 -RYDERITLHQLLTHTSGVDKLGKANRFEPGSQFEYS-NLGYSLLGQVLEKVNHQSFAEQ 220
             YD+     + +     +D +G     EPG  F YS  + ++LLG+++ +V+  +   +
Sbjct: 133 LPYDQLHNFSETIQAICALDVVG-----EPGKAFNYSPTVNHALLGEMVRRVHGAASLAE 187

Query: 221 VAQFATRYQLNGLSAELGSVAAIHTKVPSLAVGLQESEVIAPSDL--VLD-----EALLP 273
           +       +L   S  LG  + I  ++  L     E   +  +D+  V D      + +P
Sbjct: 188 LMDQRLFSRLGMSSTSLGPTSQIRDRLVPLTSDFPEGGWLTNADIKAVADAIEAPNSQMP 247

Query: 274 AGGLIASAPAYAAFQQQL 291
             G + SA     F + L
Sbjct: 248 WVGAMTSAQDVFVFAEML 265