Pairwise Alignments

Query, 405 a.a., NADH:ubiquinone oxidoreductase, Na translocating, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 343 a.a., CDP-6-deoxy-delta-3,4-glucoseen reductase from Paraburkholderia sabiae LMG 24235

 Score =  123 bits (309), Expect = 7e-33
 Identities = 93/347 (26%), Positives = 157/347 (45%), Gaps = 53/347 (15%)

Query: 44  KSIKVAAGDKLLGALASKNIFIPSACGGGGTCGQCRVKVKSGGGDILPTELGHITKKEAK 103
           +  +V   + +L A   + I +P  C  G  CG C+  V  G  +        ++  E  
Sbjct: 12  RQFQVEPDEPVLTAALRQGIGLPYGCKNGA-CGSCKGAVVGGEVEQRAHSSSALSNDEKT 70

Query: 104 EGCRLACQVAVKTDMELELEEEIFG-----VKKWQCEVISNDNKATFIKELLLKLPEGED 158
            G  L C     TD+E+++ E I G     +KK  C V + +  A  +  L L+LP  E 
Sbjct: 71  RGMALLCCTTACTDLEIDIRE-ITGLGDVQIKKLPCRVNAIERVADDVVVLKLQLPANER 129

Query: 159 VHFKAGGYIQIEAPAHVVKYADFDIPAKYRDDWEKYGLFDLVSTVNEDVLRAYSMANYPD 218
           + + AG Y++                                  + +   R+YSMAN P 
Sbjct: 130 LQYMAGQYLEF--------------------------------ILKDGKRRSYSMANAPH 157

Query: 219 EKGRIMLNVRIATPPSANVPPGKMSSYIFN-LKAGDKVTISGPFGEFFVKD-TDAEMVFI 276
            +G + L++R       ++P G  + ++FN +K  D +    P G FF+++ +D  +V +
Sbjct: 158 TEGPVELHIR-------HMPGGAFTDHVFNTMKERDILRFEAPLGTFFLREESDKPIVLL 210

Query: 277 GGGAGMAPMRSHIFDQLKSKKTKRKMSFWYGARSTREVFYQQDFDTLAAENDNFVWHVAL 336
             G G AP+++ I +    K   R M+ ++GAR  ++++  +  +  A E  NF +   L
Sbjct: 211 ASGTGFAPLKA-IVEHAAFKNITRPMTLYWGARRKKDLYMMELAEQWAREIPNFKFVPVL 269

Query: 337 SEPLPEDNWTGYTGFIHNVLYENYLKNHKAPEDCEFYMCGPPIMNSS 383
           SEP  +D WTG TGF+H  + E+ L +  A    + Y CG P+M  S
Sbjct: 270 SEPDADDAWTGRTGFVHRAVIED-LPDLSA---YQVYACGAPVMVES 312