Pairwise Alignments

Query, 405 a.a., NADH:ubiquinone oxidoreductase, Na translocating, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 344 a.a., 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases / CDP-6-deoxy-delta-3,4-glucoseen reductase-like from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  111 bits (277), Expect = 4e-29
 Identities = 92/366 (25%), Positives = 157/366 (42%), Gaps = 63/366 (17%)

Query: 52  DKLLGALASKNIFIPSACGGGGTCGQCRVKVKSGGGDILPTELGHITKKEAKEGCRLACQ 111
           + +L A   + I +P  C  G  CG C+ K+ SG       +   ++  E   G  L C 
Sbjct: 20  ESMLAAGIRQGIGLPYGCKDGA-CGSCKCKLVSGSVTHGHHQPKALSADEEAAGYVLTCC 78

Query: 112 VAVKTDMELE----LEEEIFGVKKWQCEVISNDNKATFIKELLLKLPEGEDVHFKAGGYI 167
               +D+ LE     E   F +KK    V + +  +  +  L L+LP  +   + AG Y+
Sbjct: 79  GVAHSDVVLESRQVTEAGAFPIKKMPVRVSTLERASHDVIVLRLQLPASDAFQYHAGQYV 138

Query: 168 QIEAPAHVVKYADFDIPAKYRDDWEKYGLFDLVSTVNEDVLRAYSMANYPDEKGRIMLNV 227
           +                                  + +   R+YSMAN P  +       
Sbjct: 139 EF--------------------------------LLRDGDRRSYSMANAPHTQ------- 159

Query: 228 RIATPPSA-----NVPPGKMSSYIFN-LKAGDKVTISGPFGEFFVK-DTDAEMVFIGGGA 280
             AT P+      ++P GK + ++F  +K  D + I GP+G FF++ D+D  +V +  G 
Sbjct: 160 --ATAPALELHLRHMPGGKFTDHVFGAMKEKDILRIEGPYGSFFLREDSDKPIVMLASGT 217

Query: 281 GMAPMRSHIFDQLKSKKTKRKMSFWYGARSTREVFYQQDFDTLAAENDNFVWHVALSEPL 340
           G AP+++ + + ++ K   R  + ++G R   +++     +   AE  N  +   +S+ L
Sbjct: 218 GFAPIKA-VIEHMQFKGITRPATLYWGGRRPADLYQSAWIEARLAEMPNLRYVPVVSDAL 276

Query: 341 PEDNWTGYTGFIHNVLYENY--LKNHKAPEDCEFYMCGPPIMNSSVIK-MLESLGVEPEN 397
           PED WTG TGF+H  + +++  L  H      E Y CG PI+  S  +  +   G+  E 
Sbjct: 277 PEDAWTGRTGFVHQAVLQDFPDLSGH------EVYACGAPIVVESAHRDYVAQAGLPDEA 330

Query: 398 ILLDDF 403
              D F
Sbjct: 331 FFADSF 336