Pairwise Alignments

Query, 405 a.a., NADH:ubiquinone oxidoreductase, Na translocating, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 333 a.a., 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases / CDP-6-deoxy-delta-3,4-glucoseen reductase-like from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  110 bits (276), Expect = 5e-29
 Identities = 98/368 (26%), Positives = 167/368 (45%), Gaps = 59/368 (16%)

Query: 45  SIKVAAGDKLLGALASKNIFIPSACGGGGTCGQCRVKVKSGGGDILPTELGH--ITKKEA 102
           +I  AAG  +L A+      +P +C  G  C  C+ +V SG   + P   G   +T  E 
Sbjct: 4   AIPCAAGQTVLDAVRQAGYEMPFSCNSG-VCASCKGRVVSGR--VNPGAAGEHTLTADEI 60

Query: 103 KEGCRLACQVAVKTDMELELEE----EIFGVKKWQCEVISNDNKATFIKELLLKLPEGED 158
             G  L CQ    TD+E+E  +    +    ++    V+  D  A+ +  L L+ P GE 
Sbjct: 61  AHGQVLFCQARPLTDIEIEPRQIEKTDPNARRQLAARVMRIDFLASDVARLKLRFPAGEK 120

Query: 159 VHFKAGGYIQIEAPAHVVKYADFDIPAKYRDDWEKYGLFDLVSTVNEDVLRAYSMANYPD 218
           V FKAG Y+Q+  P                                +   R++SMAN P 
Sbjct: 121 VKFKAGQYLQVLLP--------------------------------DGQRRSFSMANPPH 148

Query: 219 EKGRIMLNVRIATPPSANVPPGKMSSYI-FNLKAGDKVTISGPFGEFFVKD-TDAEMVFI 276
           +     L++R+       +  G  S ++  +LK GD + +  P G+F +++ + A +V +
Sbjct: 149 QNDGAELHIRM-------LEGGAFSHWLAHDLKVGDHLRVELPHGDFHLREGSTAPIVML 201

Query: 277 GGGAGMAPMRSHIFDQLKSKKTKRKMSFWYGARSTREVFYQQDFDTLAAENDNFVWHVAL 336
             G G AP++S + D L+  +  R+++ ++GAR+ +++ Y  +      E     +   L
Sbjct: 202 ASGTGFAPIKSMVEDGLRRGQA-REIALYWGARTEKDL-YLLELARGWGEQAGLRFVPVL 259

Query: 337 SEPLPEDNWTGYTGFIHNVLYENYLKNHKAPEDCEFYMCGPPIMNSSV-IKMLESLGVEP 395
           SEP  E  W+G TGF+H  +    L++H +    + Y CG P M S+     +E+ G+ P
Sbjct: 260 SEP--EAGWSGRTGFVHQAV----LQDHDSLAGHQVYACGAPAMVSAARSDFVETRGLPP 313

Query: 396 ENILLDDF 403
           +    D F
Sbjct: 314 DAFFCDAF 321