Pairwise Alignments

Query, 405 a.a., NADH:ubiquinone oxidoreductase, Na translocating, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 408 a.a., NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit from Kangiella aquimarina DSM 16071

 Score =  613 bits (1582), Expect = e-180
 Identities = 289/405 (71%), Positives = 345/405 (85%), Gaps = 2/405 (0%)

Query: 2   EMAIGIGMFTLVVCLLVIVILIAKKKLVTTGEITIGINDDAEKSIKVAAGDKLLGALASK 61
           E+ +G+ +FT+V+  LV+VIL A+K+LV+TG++ I IN +A+K++ V AG KLL AL+  
Sbjct: 3   EIVLGVALFTVVIFGLVMVILFARKQLVSTGDVHIDINGEADKAVTVPAGSKLLNALSDS 62

Query: 62  NIFIPSACGGGGTCGQCRVKVKSGGGDILPTELGHITKKEAKEGCRLACQVAVKTDMELE 121
            IF+ SACGGGGTCGQC  KV  GGG ILPTE  HIT++EA+EG RL+CQVAVK DM++E
Sbjct: 63  GIFLSSACGGGGTCGQCVCKVLEGGGSILPTEESHITRREAREGYRLSCQVAVKQDMKIE 122

Query: 122 LEEEIFGVKKWQCEVISNDNKATFIKELLLKLPEGEDVHFKAGGYIQIEAPAHVVKYADF 181
           + EE+FG KKW CEVISNDNKATFIKEL+LK+P GE V F+AGGYIQIEAP H VK+++F
Sbjct: 123 VPEEVFGTKKWDCEVISNDNKATFIKELVLKIPNGESVPFRAGGYIQIEAPPHKVKFSEF 182

Query: 182 DIPAKYRDDWEKYGLFDLVSTVNEDVLRAYSMANYPDEKGRIMLNVRIATPP--SANVPP 239
           D+P K+R+DWE++ LFDL S V E+ +RAYSMANYP+E+G IMLNVRIATPP    ++PP
Sbjct: 183 DVPEKFREDWERFKLFDLESEVKEETIRAYSMANYPEEEGIIMLNVRIATPPPRDMSLPP 242

Query: 240 GKMSSYIFNLKAGDKVTISGPFGEFFVKDTDAEMVFIGGGAGMAPMRSHIFDQLKSKKTK 299
           GKMSSYI+ LKAGDKVTISGP+GEFF KDTDAEMVFIGGGAGMAPMRSHIFDQL+  KT 
Sbjct: 243 GKMSSYIWGLKAGDKVTISGPYGEFFAKDTDAEMVFIGGGAGMAPMRSHIFDQLRRIKTD 302

Query: 300 RKMSFWYGARSTREVFYQQDFDTLAAENDNFVWHVALSEPLPEDNWTGYTGFIHNVLYEN 359
           RK+SFWYGARS+RE+FY +DFD LA EN NF WHVALS+P PEDNW GYTGFIHNVLYEN
Sbjct: 303 RKISFWYGARSSREMFYVEDFDMLAKENPNFEWHVALSDPQPEDNWEGYTGFIHNVLYEN 362

Query: 360 YLKNHKAPEDCEFYMCGPPIMNSSVIKMLESLGVEPENILLDDFG 404
           YLK+H APEDCEFYMCGPP+MN++ I+MLE LGVE ENILLDDFG
Sbjct: 363 YLKDHPAPEDCEFYMCGPPMMNAACIQMLEDLGVERENILLDDFG 407